Bostr.25463s0283 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.25463s0283 T297279_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.974 0.991
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.974 0.991
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.919 0.825
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.919 0.825
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.909 0.798
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.892 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25463s0283.1.p NAC/NAM 10 137

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.24145s0001 Boechera stricta Bostr.24145s0001 N
Bra008062 Brassica rapa Bra008062 N
Cagra.1013s0013 Capsella grandiflora Cagra.1013s0013 N
Carubv10021744m.g Capsella rubella Carubv10021744m.g N