Lus10015392.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10015392.g T298257_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.988 0.835
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.988 0.835
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.973 0.774
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.973 0.765
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.966 0.713
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.966 0.713
PK11990.1
M01290_2.00 		Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336 		0.949 0.800
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10015392 NAC/NAM 25 166

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

315 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TERB1 Bos taurus ENSBTAG00000016438 N
ENSBTAP00000032300-D1 Bos grunniens ENSBTAP00000032300-D1 N
TERB1 Canis familiaris ENSCAFG00000020407 N
TERB1 Callithrix jacchus ENSCJAG00000016748 N
TERB1 Cavia porcellus ENSCPOG00000015414 N
ENSCSAG00000004627 Chlorocebus sabaeus ENSCSAG00000004627 N
ENSDNOG00000032686 Dasypus novemcinctus ENSDNOG00000032686 N
TERB1 Felis catus ENSFCAG00000027927 N
TERB1 Homo sapiens ENSG00000249961 N
TERB1 Gorilla gorilla ENSGGOG00000003333 N
TERB1 Loxodonta africana ENSLAFG00000009064 N
ENSNLEG00000004017 Nomascus leucogenys ENSNLEG00000004017 N
ENSOARG00000002232 Ovis aries ENSOARG00000002232 N
TERB1 Otolemur garnettii ENSOGAG00000013265 N
ENSP00000398602 Macaca fascicularis ENSP00000398602 N
ENSPANG00000019280 Papio anubis ENSPANG00000019280 N
TERB1 Pan troglodytes ENSPTRG00000008201 N
Terb1 Rattus norvegicus ENSRNOG00000055097 N
ENSSTOG00000007763 Ictidomys tridecemlineatus ENSSTOG00000007763 N