Pavir.J34679 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J34679 T299006_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC001
M00969_2.00 		Arabidopsis thaliana
NYACGBHANN
NNTDVCGTRN		 PBM
Lindemose et al.(2014)
FL092 		0.875 0.374
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J34679.1.p NAC/NAM 11 141

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.000
GLYMA02G00981 Glycine max GLYMA02G00981 N 0.000
GLYMA03G32747 Glycine max GLYMA03G32747 I 0.000
GLYMA06G22790 Glycine max GLYMA06G22790 N 0.000
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.000
MLOC_10815 Hordeum vulgare MLOC_10815 I 0.000
MLOC_49032 Hordeum vulgare MLOC_49032 N 0.000
MLOC_77331 Hordeum vulgare MLOC_77331 I 0.000
OB03G34880 Oryza brachyantha OB03G34880 N 0.000
OB06G13990 Oryza brachyantha OB06G13990 I 0.000
OLONG_008764 Oryza longistaminata OLONG_008764 N 0.000
OLONG_014962 Oryza longistaminata OLONG_014962 I 0.000
OLONG_024366 Oryza longistaminata OLONG_024366 N 0.000
OMERI10G14830 Oryza meridionalis OMERI10G14830 N 0.000
PGSC0003DMG400024523 Solanum tuberosum PGSC0003DMG400024523 N 0.000
Thhalv10017520m.g Eutrema salsugineum Thhalv10017520m.g N 0.000
Traes_5AL_85F3BE385 Triticum aestivum Traes_5AL_85F3BE385 N 0.000
Traes_5DL_C6C077BB9 Triticum aestivum Traes_5DL_C6C077BB9 N 0.000
Traes_6AL_842E10085 Triticum aestivum Traes_6AL_842E10085 N 0.000
Traes_6DL_C8198CD4A Triticum aestivum Traes_6DL_C8198CD4A N 0.000
Traes_7BS_F67ED5C9E Triticum aestivum Traes_7BS_F67ED5C9E I 0.000
Traes_7DS_0536E73E5 Triticum aestivum Traes_7DS_0536E73E5 I 0.000