CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J38743
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J38743
T299018_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J38743.1.p
NAC/NAM
10
146
PPAFDSHPSDVVLVKSYLRPWVAQGVRPAGAFVHAADLYAAEPGELARRFRAAVARDGERAWYFLSPLRTKSPRGRRKARTVAGGAGWWHGEAGPRPVLDPLDGRRMVGYRQSFSFMRRGADGAPVRTGWIMLELRL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT5G51780
Arabidopsis thaliana
AT5G51780
I
Bo2g048240
Brassica oleracea
Bo2g048240
I
Bo7g110280
Brassica oleracea
Bo7g110280
I
Bra022562
Brassica rapa
Bra022562
I
fgenesh2_kg.8__1059__AT5G51780.1
Arabidopsis lyrata
fgenesh2_kg.8__1059__AT5G51780.1
I
Solyc06g035490.2
Solanum lycopersicum
Solyc06g035490.2
I
Thhalv10026341m.g
Eutrema salsugineum
Thhalv10026341m.g
I