CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK25119.1
(
Cannabis sativa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
PK25119.1
T299362_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.941
0.902
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.941
0.902
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.941
0.902
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.941
0.902
Traes_5BL_CC18CAD72
M11085_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC691_01
0.887
0.768
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK25119.1
NAC/NAM
12
136
PPGFRFHPTDEELIVYYLKNQATSRPCPVSIIPEVDIYKFDPWQLPDKAEFGENEWYFFSPRDRKYPNGVRPNRATISGYWKATGTDKAIYSGSKYVGVKKALVFYKGKPPKGIKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Cannabis sativa
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EROM_031400
Encephalitozoon romaleae
EROM_031400
N
NAPIS_ORF00473
Nosema apis
NAPIS_ORF00473
N