CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr5.CM0909.760.nc
(
Lotus japonicus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
chr5.CM0909.760.nc
T299412_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr5.CM0909.760.nc
NAC/NAM
6
133
SPGFRFHPTDEELVGFYLKRRVTGRLFHGDPIGIVDVYKYEPWDLPCLSKMKTRDLEWYFYSGLDKKYGKGSSRTNRATEKGYWKTTGKDRPVNHANRTVGMKKTLVYHFGRAPTGARTNWVMHEYRS
Links
Other
NAC/NAM
family TFs
Other
Lotus japonicus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29739.m003611
Ricinus communis
29739.m003611
I
AMTR_s00001p00251940
Amborella trichopoda
AMTR_s00001p00251940
I
BGIOSGA007300
Oryza indica
BGIOSGA007300
I
BRADI3G00697
Brachypodium distachyon
BRADI3G00697
I
cassava25125.valid.m1
Manihot esculenta
cassava25125.valid.m1
I
Ciclev10010595m.g
Citrus clementina
Ciclev10010595m.g
I
Ciclev10015695m.g
Citrus clementina
Ciclev10015695m.g
N
evm.TU.supercontig_126.31
Carica papaya
evm.TU.supercontig_126.31
I
evm.TU.supercontig_27.230
Carica papaya
evm.TU.supercontig_27.230
N
gene15385-v1.0-hybrid
Fragaria vesca
gene15385-v1.0-hybrid
I
Gorai.010G096900
Gossypium raimondii
Gorai.010G096900
I
GRMZM2G037128
Zea mays
GRMZM2G037128
I
GRMZM2G111760
Zea mays
GRMZM2G111760
I
GSMUA_Achr1G24120_001
Musa acuminata
GSMUA_Achr1G24120_001
I
GSMUA_Achr7G04610_001
Musa acuminata
GSMUA_Achr7G04610_001
I
GSMUA_AchrUn_randomG03020_001
Musa acuminata
GSMUA_AchrUn_randomG03020_001
I
LPERR02G00380
Leersia perrieri
LPERR02G00380
I
MLOC_25460
Hordeum vulgare
MLOC_25460
I
OB02G10400
Oryza brachyantha
OB02G10400
I
OBART02G00380
Oryza barthii
OBART02G00380
I
OGLUM02G00360
Oryza glumaepatula
OGLUM02G00360
I
OMERI02G09240
Oryza meridionalis
OMERI02G09240
I
ONIVA02G00390
Oryza nivara
ONIVA02G00390
I
OPUNC02G00050
Oryza punctata
OPUNC02G00050
I
orange1.1g009174m.g
Citrus sinensis
orange1.1g009174m.g
I
orange1.1g017956m.g
Citrus sinensis
orange1.1g017956m.g
N
ORGLA02G0003500
Oryza glaberrima
ORGLA02G0003500
I
ORUFI02G00410
Oryza rufipogon
ORUFI02G00410
I
OS02G0104500
Oryza sativa
OS02G0104500
D
Pavir.Aa03569
Panicum virgatum
Pavir.Aa03569
I
Pavir.Ab00054
Panicum virgatum
Pavir.Ab00054
I
POPTR_0006s23800
Populus trichocarpa
POPTR_0006s23800
I
POPTR_0018s05520
Populus trichocarpa
POPTR_0018s05520
I
POPTR_0018s05540
Populus trichocarpa
POPTR_0018s05540
I
POPTR_0310s00200
Populus trichocarpa
POPTR_0310s00200
I
SapurV1A.0435s0090
Salix purpurea
SapurV1A.0435s0090
I
SapurV1A.0710s0040
Salix purpurea
SapurV1A.0710s0040
I
Sb04g000520
Sorghum bicolor
Sb04g000520
I
Si033157m.g
Setaria italica
Si033157m.g
I
TCM_037381
Theobroma cacao
TCM_037381
I
Traes_6AS_52AE4A6E2
Triticum aestivum
Traes_6AS_52AE4A6E2
I
TRIUR3_30093
Triticum urartu
TRIUR3_30093
I
VIT_04s0008g01850
Vitis vinifera
VIT_04s0008g01850
I