MDP0000239523 (Malus domestica)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 MDP0000239523 T300978_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000239523 NFX 179 196
MDP0000239523 NFX 231 249
MDP0000239523 NFX 285 303
MDP0000239523 NFX 339 358
MDP0000239523 NFX 392 410
MDP0000239523 NFX 457 469
MDP0000239523 NFX 478 489
MDP0000239523 NFX 586 603
MDP0000239523 NFX 649 669

Links

Other NFX family TFs
Other Malus domestica TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA023869 Oryza indica BGIOSGA023869 N
BRADI1G61110 Brachypodium distachyon BRADI1G61110 N
GRMZM2G017145 Zea mays GRMZM2G017145 N
GRMZM2G350312 Zea mays GRMZM2G350312 N
LPERR07G20030 Leersia perrieri LPERR07G20030 N
OB07G28610 Oryza brachyantha OB07G28610 N
OBART07G23020 Oryza barthii OBART07G23020 N
OGLUM07G23080 Oryza glumaepatula OGLUM07G23080 N
OLONG_009586 Oryza longistaminata OLONG_009586 N
OMERI07G19420 Oryza meridionalis OMERI07G19420 N
ONIVA07G22640 Oryza nivara ONIVA07G22640 N
OPUNC07G21640 Oryza punctata OPUNC07G21640 N
OPUNC07G21720 Oryza punctata OPUNC07G21720 N
ORGLA07G0180200 Oryza glaberrima ORGLA07G0180200 N
ORUFI07G24160 Oryza rufipogon ORUFI07G24160 N
BHLH062 Oryza sativa OS07G0628500 N
Pavir.Ba00364 Panicum virgatum Pavir.Ba00364 N
Pavir.Bb03409 Panicum virgatum Pavir.Bb03409 N
Pavir.Ia03149 Panicum virgatum Pavir.Ia03149 N
Pavir.J37675 Panicum virgatum Pavir.J37675 N
PDK_20s1715301g001 Phoenix dactylifera PDK_20s1715301g001 N
Sb02g040140 Sorghum bicolor Sb02g040140 N
Si037016m.g Setaria italica Si037016m.g N