CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LjT47B05.50.nd
(
Lotus japonicus
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
LjT47B05.50.nd
T301030_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT47B05.50.nd
NFX
184
201
CGHHCLLLCHPGPCPSCP
LjT47B05.50.nd
NFX
236
254
CGVHRCVEVCHRGPCPPCR
LjT47B05.50.nd
NFX
289
307
CGKHVCEKGCHSGECGECP
LjT47B05.50.nd
NFX
343
362
CGYHRCPERCHRGQCVENCR
LjT47B05.50.nd
NFX
396
414
CGRHACKRRCCDGDCPPCA
LjT47B05.50.nd
NFX
417
441
CGRRLRCKSHKCPSPCHRGACAPCP
LjT47B05.50.nd
NFX
488
500
PHKCHYGACPPCR
LjT47B05.50.nd
NFX
591
602
CGNHYCTKTCHA
LjT47B05.50.nd
NFX
633
650
CPHHCPRRCHPGDCPPCK
Links
Other
NFX
family TFs
Other
Lotus japonicus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB08540.1
Alternaria brassicicola
AB08540.1
N
COCC4DRAFT_140005
Bipolaris maydis
COCC4DRAFT_140005
N
COCCADRAFT_84193
Bipolaris zeicola
COCCADRAFT_84193
N
COCMIDRAFT_84123
Bipolaris oryzae
COCMIDRAFT_84123
N
COCSADRAFT_179967
Bipolaris sorokiniana
COCSADRAFT_179967
N
COCVIDRAFT_99557
Bipolaris victoriae
COCVIDRAFT_99557
N
gw1.8.124.1
Mycosphaerella graminicola
gw1.8.124.1
N
MYCFIDRAFT_203796
Pseudocercospora fijiensis
MYCFIDRAFT_203796
N
Mycgr3G11785
Zymoseptoria tritici
Mycgr3G11785
N
PTRG_01922
Pyrenophora triticirepentis
PTRG_01922
N
PTT_13993
Pyrenophora teres
PTT_13993
N
SEPMUDRAFT_67051
Sphaerulina musiva
SEPMUDRAFT_67051
N
SETTUDRAFT_90517
Setosphaeria turcica
SETTUDRAFT_90517
N