CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HR83
(
Aedes aegypti
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
AAEL007350
T301219_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr83
M06434_2.00
Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY
B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436
0.977
0.686
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN
NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.786
0.643
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN
NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.786
0.643
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN
NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.786
0.643
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA
TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.786
0.643
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.786
0.643
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW
WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.786
0.643
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.786
0.643
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN
NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.786
0.643
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN
NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.786
0.643
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL007350-PA
Nuclear receptor
5
75
MLCKVCGDRSSGKHYGSICCDGCSCFFKRSIRKRAFYTCISGQGGCSVDKARRNWCPFCRLQKCFLVGMNA
Links
Other
Nuclear receptor
family TFs
Other
Aedes aegypti
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27763.m000042
Ricinus communis
27763.m000042
I
0.000
30128.m008730
Ricinus communis
30128.m008730
I
0.000
Aquca_015_00088
Aquilegia coerulea
Aquca_015_00088
I
0.000
Aquca_015_00090
Aquilegia coerulea
Aquca_015_00090
I
0.000
Aquca_047_00006
Aquilegia coerulea
Aquca_047_00006
I
0.000
MYB75
Arabidopsis thaliana
AT1G56650
I
0.000
MYB113
Arabidopsis thaliana
AT1G66370
D
0.000
MYB114
Arabidopsis thaliana
AT1G66380
I
0.000
MYB90
Arabidopsis thaliana
AT1G66390
I
0.000
Bo6g099880
Brassica oleracea
Bo6g099880
I
0.000
Bo6g100940
Brassica oleracea
Bo6g100940
I
0.000
Bostr.26959s0279
Boechera stricta
Bostr.26959s0279
I
0.000
Bra004162
Brassica rapa
Bra004162
I
0.000
Cagra.0463s0008
Capsella grandiflora
Cagra.0463s0008
I
0.000
Cagra.2400s0001
Capsella grandiflora
Cagra.2400s0001
I
0.000
Cagra.2629s0007
Capsella grandiflora
Cagra.2629s0007
I
0.000
Carubv10020856m.g
Capsella rubella
Carubv10020856m.g
I
0.000
Ca_19630
Cicer arietinum
Ca_19630
I
0.000
Ca_22078
Cicer arietinum
Ca_22078
I
0.000
chr1.CM0141.350.nd
Lotus japonicus
chr1.CM0141.350.nd
I
0.000
Ciclev10013455m.g
Citrus clementina
Ciclev10013455m.g
I
0.000
Eucgr.F02842
Eucalyptus grandis
Eucgr.F02842
I
0.000
Eucgr.J01553
Eucalyptus grandis
Eucgr.J01553
I
0.000
Eucgr.J01555
Eucalyptus grandis
Eucgr.J01555
I
0.000
Eucgr.J01569
Eucalyptus grandis
Eucgr.J01569
I
0.000
Eucgr.J01573
Eucalyptus grandis
Eucgr.J01573
I
0.000
Eucgr.J01574
Eucalyptus grandis
Eucgr.J01574
I
0.000
Eucgr.J01576
Eucalyptus grandis
Eucgr.J01576
I
0.000
Eucgr.J01578
Eucalyptus grandis
Eucgr.J01578
I
0.000
Eucgr.J01580
Eucalyptus grandis
Eucgr.J01580
I
0.000
Eucgr.J01586
Eucalyptus grandis
Eucgr.J01586
I
0.000
PAP1
Arabidopsis lyrata
fgenesh2_kg.1__4777__AT1G56650.1
I
0.000
MYB113
Arabidopsis lyrata
fgenesh2_kg.2__869__AT1G66370.1
I
0.000
gene31413-v1.0-hybrid
Fragaria vesca
gene31413-v1.0-hybrid
I
0.000
GLYMA07G16980
Glycine max
GLYMA07G16980
I
0.000
GLYMA09G36966
Glycine max
GLYMA09G36966
I
0.000
GLYMA09G37010
Glycine max
GLYMA09G37010
I
0.000
GLYMA18G41520
Glycine max
GLYMA18G41520
I
0.000
GLYMA18G49670
Glycine max
GLYMA18G49670
I
0.000
GLYMA18G49690
Glycine max
GLYMA18G49690
I
0.000
GLYMA19G02980
Glycine max
GLYMA19G02980
I
0.000
Gorai.001G087200
Gossypium raimondii
Gorai.001G087200
I
0.000
Gorai.001G087400
Gossypium raimondii
Gorai.001G087400
I
0.000
Lus10009129.g
Linum usitatissimum
Lus10009129.g
I
0.000
Lus10009130.g
Linum usitatissimum
Lus10009130.g
I
0.000
Lus10028513.g
Linum usitatissimum
Lus10028513.g
I
0.000
Lus10028514.g
Linum usitatissimum
Lus10028514.g
I
0.000
MTR_0001s0360
Medicago truncatula
MTR_0001s0360
I
0.000
MTR_0197s0010
Medicago truncatula
MTR_0197s0010
I
0.000
MTR_5g078800
Medicago truncatula
MTR_5g078800
I
0.000
MTR_5g078860
Medicago truncatula
MTR_5g078860
I
0.000
MTR_5g078910
Medicago truncatula
MTR_5g078910
I
0.000
MTR_5g078930
Medicago truncatula
MTR_5g078930
I
0.000
MTR_5g079120
Medicago truncatula
MTR_5g079120
I
0.000
MTR_5g079220
Medicago truncatula
MTR_5g079220
I
0.000
MTR_5g079290
Medicago truncatula
MTR_5g079290
I
0.000
MTR_7g017260
Medicago truncatula
MTR_7g017260
I
0.000
MTR_8g060940
Medicago truncatula
MTR_8g060940
I
0.000
PK05760.1
Cannabis sativa
PK05760.1
I
0.000
Pm029440
Prunus mume
Pm029440
I
0.000
Pm029442
Prunus mume
Pm029442
I
0.000
Pm029445
Prunus mume
Pm029445
I
0.000
PRUPE_ppa010069mg
Prunus persica
PRUPE_ppa010069mg
I
0.000
PRUPE_ppa020385mg
Prunus persica
PRUPE_ppa020385mg
I
0.000
PRUPE_ppa026640mg
Prunus persica
PRUPE_ppa026640mg
I
0.000
scaffold_201357.1
Arabidopsis lyrata
scaffold_201357.1
I
0.000
ATMYB90
Arabidopsis lyrata
scaffold_201358.1
I
0.000
Solyc10g086250.1
Solanum lycopersicum
Solyc10g086250.1
I
0.000
Solyc10g086260.1
Solanum lycopersicum
Solyc10g086260.1
I
0.000
Solyc10g086270.1
Solanum lycopersicum
Solyc10g086270.1
I
0.000
Solyc10g086290.1
Solanum lycopersicum
Solyc10g086290.1
I
0.000
TCM_019192
Theobroma cacao
TCM_019192
I
0.000
Thhalv10019041m.g
Eutrema salsugineum
Thhalv10019041m.g
I
0.000
VIT_02s0033g00410
Vitis vinifera
VIT_02s0033g00410
I
0.000
VIT_02s0033g00450
Vitis vinifera
VIT_02s0033g00450
I
0.000
VIT_14s0006g01290
Vitis vinifera
VIT_14s0006g01290
I
0.000