CBG01250 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG01250 T301427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG01250
M02391_2.00		 Caenorhabditis briggsae
WBYGTGTC
GACACRVW		 PBM
Weirauch et al.(2014)
pTH6110		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.851 0.580
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.851 0.580
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02391_2.00 Nuclear receptor 1 72

DNA Binding Domains

Protein ID Domain From To Sequence
CBG01250 Nuclear receptor 9 80

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I
MDP0000264179 Malus domestica MDP0000264179 N