CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NR2E3
(
Pteropus vampyrus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSPVAG00000009088
T304664_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN
NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.987
1.000
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD
HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.987
1.000
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.987
1.000
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA
TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.987
0.986
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.985
0.986
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.983
0.986
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN
NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.980
0.986
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM
KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.977
0.843
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.977
0.843
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000008575
Nuclear receptor
45
115
LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQ
Links
Other
Nuclear receptor
family TFs
Other
Pteropus vampyrus
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000017837
Ailuropoda melanoleuca
ENSAMEG00000017837
I
0.000
E4F1
Bos taurus
ENSBTAG00000009961
I
0.000
E4F1
Callithrix jacchus
ENSCJAG00000015000
I
0.000
E4F1
Cavia porcellus
ENSCPOG00000002052
I
0.000
ENSCSAG00000010850
Chlorocebus sabaeus
ENSCSAG00000010850
I
0.000
E4F1
Dasypus novemcinctus
ENSDNOG00000016503
I
0.000
E4f1
Dipodomys ordii
ENSDORG00000001751
I
0.000
E4F1
Equus caballus
ENSECAG00000008036
I
0.000
E4F1
Homo sapiens
ENSG00000167967
D
0.000
E4F1
Gorilla gorilla
ENSGGOG00000014241
I
0.000
E4F1
Loxodonta africana
ENSLAFG00000000725
I
0.000
E4F1
Microcebus murinus
ENSMICG00000005892
I
0.000
E4F1
Myotis lucifugus
ENSMLUG00000016786
I
0.000
E4F1
Macaca mulatta
ENSMMUG00000019235
I
0.000
ENSMPUG00000015378
Mustela putorius furo
ENSMPUG00000015378
I
0.000
E4f1
Mus musculus
ENSMUSG00000024137
D
0.000
ENSNLEG00000009261
Nomascus leucogenys
ENSNLEG00000009261
I
0.000
ENSOARG00000017910
Ovis aries
ENSOARG00000017910
I
0.000
E4F1
Oryctolagus cuniculus
ENSOCUG00000025484
I
0.000
E4F1
Otolemur garnettii
ENSOGAG00000006594
I
0.000
E4F1
Ochotona princeps
ENSOPRG00000002573
I
0.000
ENSP00000301727
Macaca fascicularis
ENSP00000301727
I
0.000
ENSP00000301727-D1
Bos grunniens
ENSP00000301727-D1
I
0.000
ENSPANG00000017016
Papio anubis
ENSPANG00000017016
I
0.000
E4F1
Procavia capensis
ENSPCAG00000004337
I
0.000
E4f1
Rattus norvegicus
ENSRNOG00000009224
I
0.000
E4F1
Sus scrofa
ENSSSCG00000008047
I
0.000
ENSSTOG00000013171
Ictidomys tridecemlineatus
ENSSTOG00000013171
I
0.000
E4F1
Tursiops truncatus
ENSTTRG00000008208
I
0.000
Myotis_brandtii_E4f1_10005619
Myotis brandtii
Myotis_brandtii_E4f1_10005619
I
0.000