LDEC005682 (Leptinotarsa decemlineata)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 LDEC005682 T307139_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tll
M02408_2.00 		Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN		 PBM
Weirauch et al.(2014)
pTH5714 		0.957 0.739
tll
M03932_2.00 		Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN		 SELEX
Nitta et al.(2015)
tll_1 		0.957 0.739
tll
M03933_2.00 		Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN		 SELEX
Nitta et al.(2015)
tll_2 		0.957 0.739
tll
M06558_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Mathelier et al.(2014)
MA0459.1 		0.957 0.739
tll
M06424_2.00 		Drosophila melanogaster
AAAGTYA
TRACTTT		 B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720 		0.957 0.739
tll
M06425_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720 		0.957 0.739
tll
M09688_2.00 		Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK		 Misc
Kulakovskiy et al.(2009)
tll 		0.957 0.739
tll
M11190_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TLL_Q6 		0.957 0.739
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.856 0.710
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.856 0.710
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.856 0.710
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.856 0.710
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.856 0.710
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.856 0.710
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.856 0.710
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.856 0.710
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.856 0.710
dsf
M06431_2.00 		Drosophila melanogaster
AAAAGTCANH
DNTGACTTTT		 B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381 		0.822 0.681
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC005682-PA Nuclear receptor 28 98

Links

Other Nuclear receptor family TFs
Other Leptinotarsa decemlineata TFs

248 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m013885 Ricinus communis 30147.m013885 I 0.000
AMTR_s00045p00146180 Amborella trichopoda AMTR_s00045p00146180 I 0.000
Aquca_003_00245 Aquilegia coerulea Aquca_003_00245 I 0.000
Aquca_011_00538 Aquilegia coerulea Aquca_011_00538 I 0.000
MYB86 Arabidopsis thaliana AT5G26660 I 0.000
BGIOSGA000952 Oryza indica BGIOSGA000952 I 0.000
BGIOSGA001460 Oryza indica BGIOSGA001460 I 0.000
BGIOSGA001461 Oryza indica BGIOSGA001461 I 0.000
BGIOSGA001872 Oryza indica BGIOSGA001872 I 0.000
BGIOSGA019160 Oryza indica BGIOSGA019160 I 0.000
BGIOSGA020297 Oryza indica BGIOSGA020297 I 0.000
Bo2g156300 Brassica oleracea Bo2g156300 I 0.000
Bo7g095130 Brassica oleracea Bo7g095130 I 0.000
Bo9g010860 Brassica oleracea Bo9g010860 I 0.000
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.000
Bra036588 Brassica rapa Bra036588 I 0.000
BRADI2G17982 Brachypodium distachyon BRADI2G17982 I 0.000
BRADI2G40620 Brachypodium distachyon BRADI2G40620 I 0.000
BRADI2G47590 Brachypodium distachyon BRADI2G47590 I 0.000
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.000
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.000
cassava19716.m1 Manihot esculenta cassava19716.m1 I 0.000
cassava33965.m1 Manihot esculenta cassava33965.m1 I 0.000
Ca_08822 Cicer arietinum Ca_08822 I 0.000
chr4.CM0172.120.nc Lotus japonicus chr4.CM0172.120.nc I 0.000
Ciclev10024338m.g Citrus clementina Ciclev10024338m.g I 0.000
Cla003497 Citrullus lanatus Cla003497 I 0.000
Cla019513 Citrullus lanatus Cla019513 I 0.000
Cucsa.098700 Cucumis sativus Cucsa.098700 I 0.000
Cucsa.196550 Cucumis sativus Cucsa.196550 I 0.000
Eucgr.B00229 Eucalyptus grandis Eucgr.B00229 I 0.000
Eucgr.B02197 Eucalyptus grandis Eucgr.B02197 I 0.000
Eucgr.K02806 Eucalyptus grandis Eucgr.K02806 I 0.000
evm.TU.supercontig_110.11 Carica papaya evm.TU.supercontig_110.11 I 0.000
F775_01821 Aegilops tauschii F775_01821 I 0.000
F775_12496 Aegilops tauschii F775_12496 I 0.000
F775_15721 Aegilops tauschii F775_15721 I 0.000
F775_27188 Aegilops tauschii F775_27188 N 0.000
F775_28584 Aegilops tauschii F775_28584 I 0.000
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.000
gene09845-v1.0-hybrid Fragaria vesca gene09845-v1.0-hybrid I 0.000
GLYMA04G36110 Glycine max GLYMA04G36110 I 0.000
GLYMA05G02550 Glycine max GLYMA05G02550 I 0.000
GLYMA06G18830 Glycine max GLYMA06G18830 I 0.000
GLYMA10G28250 Glycine max GLYMA10G28250 I 0.000
GLYMA17G09310 Glycine max GLYMA17G09310 I 0.000
GRMZM2G003406 Zea mays GRMZM2G003406 I 0.000
GRMZM2G052377 Zea mays GRMZM2G052377 I 0.000
GRMZM2G064744 Zea mays GRMZM2G064744 I 0.000
GRMZM2G119693 Zea mays GRMZM2G119693 I 0.000
GRMZM2G127490 Zea mays GRMZM2G127490 I 0.000
GRMZM2G171781 Zea mays GRMZM2G171781 I 0.000
GRMZM2G175232 Zea mays GRMZM2G175232 I 0.000
GSMUA_Achr11G00430_001 Musa acuminata GSMUA_Achr11G00430_001 I 0.000
GSMUA_Achr11G15910_001 Musa acuminata GSMUA_Achr11G15910_001 I 0.000
GSMUA_Achr1G18990_001 Musa acuminata GSMUA_Achr1G18990_001 I 0.000
GSMUA_Achr2G01830_001 Musa acuminata GSMUA_Achr2G01830_001 I 0.000
GSMUA_Achr2G18440_001 Musa acuminata GSMUA_Achr2G18440_001 I 0.000
GSMUA_Achr3G12200_001 Musa acuminata GSMUA_Achr3G12200_001 I 0.000
GSMUA_Achr3G24580_001 Musa acuminata GSMUA_Achr3G24580_001 I 0.000
GSMUA_Achr3G28540_001 Musa acuminata GSMUA_Achr3G28540_001 I 0.000
GSMUA_Achr4G06410_001 Musa acuminata GSMUA_Achr4G06410_001 N 0.000
GSMUA_Achr4G13280_001 Musa acuminata GSMUA_Achr4G13280_001 N 0.000
GSMUA_Achr5G18400_001 Musa acuminata GSMUA_Achr5G18400_001 I 0.000
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.000
GSMUA_Achr8G18730_001 Musa acuminata GSMUA_Achr8G18730_001 I 0.000
GSMUA_Achr9G22190_001 Musa acuminata GSMUA_Achr9G22190_001 I 0.000
GSMUA_AchrUn_randomG21080_001 Musa acuminata GSMUA_AchrUn_randomG21080_001 I 0.000
LPERR01G10930 Leersia perrieri LPERR01G10930 I 0.000
LPERR01G16340 Leersia perrieri LPERR01G16340 I 0.000
LPERR01G24020 Leersia perrieri LPERR01G24020 N 0.000
LPERR05G02400 Leersia perrieri LPERR05G02400 I 0.000
LPERR05G20350 Leersia perrieri LPERR05G20350 N 0.000
MDP0000256645 Malus domestica MDP0000256645 I 0.000
MDP0000852549 Malus domestica MDP0000852549 I 0.000
mgf026023m Mimulus guttatus mgf026023m I 0.000
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.000
MLOC_6156 Hordeum vulgare MLOC_6156 I 0.000
MTR_1g112760 Medicago truncatula MTR_1g112760 I 0.000
MTR_3g077110 Medicago truncatula MTR_3g077110 I 0.000
MTR_4g105130 Medicago truncatula MTR_4g105130 I 0.000
OB01G14210 Oryza brachyantha OB01G14210 I 0.000
OB01G21720 Oryza brachyantha OB01G21720 I 0.000
OB01G28670 Oryza brachyantha OB01G28670 I 0.000
OB01G37060 Oryza brachyantha OB01G37060 I 0.000
OB05G12630 Oryza brachyantha OB05G12630 I 0.000
OB05G32030 Oryza brachyantha OB05G32030 I 0.000
OBART01G11910 Oryza barthii OBART01G11910 I 0.000
OBART01G18830 Oryza barthii OBART01G18830 I 0.000
OBART05G02690 Oryza barthii OBART05G02690 I 0.000
OGLUM01G13340 Oryza glumaepatula OGLUM01G13340 I 0.000
OGLUM01G22380 Oryza glumaepatula OGLUM01G22380 I 0.000
OGLUM05G02680 Oryza glumaepatula OGLUM05G02680 I 0.000
OLONG_008768 Oryza longistaminata OLONG_008768 I 0.000
OLONG_014417 Oryza longistaminata OLONG_014417 I 0.000
OMERI01G17650 Oryza meridionalis OMERI01G17650 I 0.000
OMERI05G02610 Oryza meridionalis OMERI05G02610 I 0.000
OMERI05G21780 Oryza meridionalis OMERI05G21780 I 0.000
ONIVA01G14120 Oryza nivara ONIVA01G14120 I 0.000
ONIVA01G21360 Oryza nivara ONIVA01G21360 I 0.000
ONIVA05G02580 Oryza nivara ONIVA05G02580 I 0.000
OPUNC01G11600 Oryza punctata OPUNC01G11600 I 0.000
OPUNC01G19230 Oryza punctata OPUNC01G19230 I 0.000
OPUNC05G02540 Oryza punctata OPUNC05G02540 I 0.000
orange1.1g016021m.g Citrus sinensis orange1.1g016021m.g I 0.000
ORGLA01G0100400 Oryza glaberrima ORGLA01G0100400 I 0.000
ORGLA01G0154000 Oryza glaberrima ORGLA01G0154000 I 0.000
ORGLA01G0230000 Oryza glaberrima ORGLA01G0230000 I 0.000
ORGLA05G0025500 Oryza glaberrima ORGLA05G0025500 I 0.000
ORGLA05G0210500 Oryza glaberrima ORGLA05G0210500 I 0.000
ORUFI01G12800 Oryza rufipogon ORUFI01G12800 I 0.000
ORUFI01G21210 Oryza rufipogon ORUFI01G21210 I 0.000
ORUFI05G02790 Oryza rufipogon ORUFI05G02790 I 0.000
OS01G0285300 Oryza sativa OS01G0285300 I 0.000
OS01G0702700 Oryza sativa OS01G0702700 I 0.000
OS05G0140100 Oryza sativa OS05G0140100 I 0.000
OS05G0543600 Oryza sativa OS05G0543600 I 0.000
Pavir.Ca01788 Panicum virgatum Pavir.Ca01788 I 0.000
Pavir.Ea00486 Panicum virgatum Pavir.Ea00486 I 0.000
Pavir.Ea01054 Panicum virgatum Pavir.Ea01054 I 0.000
Pavir.Eb00460 Panicum virgatum Pavir.Eb00460 I 0.000
Pavir.Eb01178 Panicum virgatum Pavir.Eb01178 I 0.000
Pavir.J18139 Panicum virgatum Pavir.J18139 I 0.000
Pavir.J19191 Panicum virgatum Pavir.J19191 I 0.000
Pavir.J20716 Panicum virgatum Pavir.J20716 I 0.000
Pavir.J31344 Panicum virgatum Pavir.J31344 I 0.000
Pavir.J40848 Panicum virgatum Pavir.J40848 I 0.000
PGSC0003DMG400027077 Solanum tuberosum PGSC0003DMG400027077 I 0.000
PK14287.1 Cannabis sativa PK14287.1 I 0.000
PK22647.1 Cannabis sativa PK22647.1 I 0.000
Pm024326 Prunus mume Pm024326 I 0.000
POPTR_0012s08600 Populus trichocarpa POPTR_0012s08600 I 0.000
POPTR_0015s09430 Populus trichocarpa POPTR_0015s09430 I 0.000
PRUPE_ppa018561mg Prunus persica PRUPE_ppa018561mg I 0.000
SapurV1A.0011s0520 Salix purpurea SapurV1A.0011s0520 I 0.000
SapurV1A.0127s0240 Salix purpurea SapurV1A.0127s0240 I 0.000
SapurV1A.1077s0040 Salix purpurea SapurV1A.1077s0040 I 0.000
Sb03g004600 Sorghum bicolor Sb03g004600 I 0.000
Sb03g011640 Sorghum bicolor Sb03g011640 I 0.000
Sb03g024500 Sorghum bicolor Sb03g024500 I 0.000
Sb03g032260 Sorghum bicolor Sb03g032260 I 0.000
Sb09g003100 Sorghum bicolor Sb09g003100 I 0.000
Sb09g027200 Sorghum bicolor Sb09g027200 I 0.000
Si001565m.g Setaria italica Si001565m.g I 0.000
Si002220m.g Setaria italica Si002220m.g I 0.000
Si002550m.g Setaria italica Si002550m.g I 0.000
Si005548m.g Setaria italica Si005548m.g I 0.000
Si022113m.g Setaria italica Si022113m.g I 0.000
Si022730m.g Setaria italica Si022730m.g I 0.000
Solyc01g087130.2 Solanum lycopersicum Solyc01g087130.2 I 0.000
Solyc06g071690.2 Solanum lycopersicum Solyc06g071690.2 I 0.000
TCM_012174 Theobroma cacao TCM_012174 I 0.000
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.000
TRAES3BF071400020CFD_g Triticum aestivum TRAES3BF071400020CFD_g I 0.000
TRAES3BF082500050CFD_g Triticum aestivum TRAES3BF082500050CFD_g I 0.000
Traes_1AL_1A93B0C96 Triticum aestivum Traes_1AL_1A93B0C96 I 0.000
Traes_1AL_25726E5E7 Triticum aestivum Traes_1AL_25726E5E7 I 0.000
Traes_1AL_343F2D219 Triticum aestivum Traes_1AL_343F2D219 I 0.000
Traes_1AL_C7FD90C13 Triticum aestivum Traes_1AL_C7FD90C13 I 0.000
Traes_1AS_1EE692FDC Triticum aestivum Traes_1AS_1EE692FDC I 0.000
Traes_1BS_92EA1F290 Triticum aestivum Traes_1BS_92EA1F290 I 0.000
Traes_1DS_5BAD8947E Triticum aestivum Traes_1DS_5BAD8947E I 0.000
Traes_2AS_731C703DE Triticum aestivum Traes_2AS_731C703DE I 0.000
Traes_2BS_E1E541767 Triticum aestivum Traes_2BS_E1E541767 I 0.000
Traes_2DS_3569AEDFB Triticum aestivum Traes_2DS_3569AEDFB I 0.000
Traes_3DL_46F83C41D Triticum aestivum Traes_3DL_46F83C41D N 0.000
TRIUR3_16874 Triticum urartu TRIUR3_16874 I 0.000
TRIUR3_16876 Triticum urartu TRIUR3_16876 I 0.000
TRIUR3_27020 Triticum urartu TRIUR3_27020 I 0.000
VIT_14s0060g00240 Vitis vinifera VIT_14s0060g00240 I 0.000
VIT_17s0000g09080 Vitis vinifera VIT_17s0000g09080 I 0.000