CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc03121
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc03121
T307354_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc03121
Nuclear receptor
7
82
KQCKVCGAKENVYYHFGVCTCRACGAFFRRYLENENKKKFTKCKCSEKNKDEKAQPDLTKCKKCRLDKCLFAGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf04083-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04083-augustus-gene-0.6
N
0.917
maker-nMf.1.1.scaf08489-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08489-snap-gene-0.4
N
0.826
maker-nMf.1.1.scaf11243-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf11243-snap-gene-0.6
N
0.759
Minc03112
Meloidogyne incognita
Minc03112
N
0.888
Minc03116
Meloidogyne incognita
Minc03116
N
0.781
Minc03124
Meloidogyne incognita
Minc03124
N
0.863
Minc03125
Meloidogyne incognita
Minc03125
N
0.802
Minc04767
Meloidogyne incognita
Minc04767
N
0.804
Minc05949
Meloidogyne incognita
Minc05949
N
0.990
Minc05955
Meloidogyne incognita
Minc05955
N
0.856
Minc06648
Meloidogyne incognita
Minc06648
N
0.796
Minc06656
Meloidogyne incognita
Minc06656
N
0.788
Minc11359
Meloidogyne incognita
Minc11359
N
0.807
Minc17472
Meloidogyne incognita
Minc17472
N
0.756
Minc18240
Meloidogyne incognita
Minc18240
N
0.787