ASU_07884 (Ascaris suum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 ASU_07884 T308164_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.980 0.900
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.980 0.886
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.968 0.843
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.968 0.843
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.968 0.843
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.968 0.829
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.963 0.829
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.957 0.829
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.950 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_07884 Nuclear receptor 137 207

Links

Other Nuclear receptor family TFs
Other Ascaris suum TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_09317 Cladophialophora psammophila A1O5_09317 I
A1O7_07588 Cladophialophora yegresii A1O7_07588 I
A1O7_09309 Cladophialophora yegresii A1O7_09309 I
A1O9_12115 Exophiala aquamarina A1O9_12115 I
ACRE_014900 Acremonium chrysogenum ACRE_014900 I
BAUCODRAFT_53895 Baudoinia compniacensis BAUCODRAFT_53895 I
BBA_02662 Beauveria bassiana BBA_02662 I
estExt_Genewise1Plus.C_13560 Cryphonectria parasitica estExt_Genewise1Plus.C_13560 I
e_gw1.6.920.1 Nectria haematococca e_gw1.6.920.1 I
F503_07199 Ophiostoma piceae uamh F503_07199 I
FOXG_01595 Fusarium oxysporum FOXG_01595 I
FPSE_03183 Fusarium pseudograminearum FPSE_03183 I
FVEG_07955 Fusarium verticillioides FVEG_07955 I
G647_02495 Cladophialophora carrionii G647_02495 I
HMPREF1624_04628 Sporothrix schenckii HMPREF1624_04628 I
M438DRAFT_272404 Aureobasidium pullulans M438DRAFT_272404 I
MAC_00750 Metarhizium acridum MAC_00750 I
MAJ_08974 Metarhizium majus MAJ_08974 I
MANI_121894 Metarhizium anisopliae MANI_121894 I
MBR_06137 Metarhizium brunneum MBR_06137 I
MGU_10045 Metarhizium guizhouense MGU_10045 I
NechaG49195 Fusarium solani NechaG49195 I
PV04_08060 Capronia semiimmersa PV04_08060 I
PV05_05046 Exophiala xenobiotica PV05_05046 I
PV06_00923 Exophiala oligosperma PV06_00923 I
PV07_11766 Cladophialophora immunda PV07_11766 I
PV08_00614 Exophiala spinifera PV08_00614 I
S40285_05512 Stachybotrys chlorohalonata S40285_05512 I
S40288_01495 Stachybotrys chartarum S40288_01495 I
SPBR_05567 Sporothrix brasiliensis SPBR_05567 I
TRIATDRAFT_233204 Trichoderma atroviride TRIATDRAFT_233204 I
TRIREDRAFT_53877 Trichoderma reesei TRIREDRAFT_53877 I
TRIVIDRAFT_188169 Trichoderma virens TRIVIDRAFT_188169 I
UCREL1_367 Eutypa lata UCREL1_367 I
VHEMI01120 Torrubiella hemipterigena VHEMI01120 I
X797_010350 Metarhizium robertsii X797_010350 I
Z517_03173 Fonsecaea pedrosoi Z517_03173 I
Z518_09326 Rhinocladiella mackenziei Z518_09326 I
Z519_01249 Cladophialophora bantiana Z519_01249 I