CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGOC_0000264301
(
Cylicostephanus goldi
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
CGOC_0000264301
T308364_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odr-7
M00697_2.00
Caenorhabditis elegans
NDWTTGTAGNN
NNCTACAAWHN
PBM
Narasimhan et al.(2015)
pTH9323
0.837
0.843
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CGOC_0000264301-mRNA-1
Nuclear receptor
182
233
QDCQVCHSTHANGLHFGARTCAACAAFFRRTISDGKKYVCKRSQRCNNPSRD
Links
Other
Nuclear receptor
family TFs
Other
Cylicostephanus goldi
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000449001
Angiostrongylus cantonensis
ACAC_0000449001
I
0.879
ACOC_0001074701
Angiostrongylus costaricensis
ACOC_0001074701
I
0.879
ANCCAN_08211
Ancylostoma caninum
ANCCAN_08211
I
0.829
CBG00123
Caenorhabditis briggsae
CBG00123
I
0.832
CRE14738
Caenorhabditis remanei
CRE14738
I
0.837
DICVIV_10361
Dictyocaulus viviparus
DICVIV_10361
I
0.879
Hba_12147
Heterorhabditis bacteriophora
Hba_12147
I
0.820
OESDEN_00181
Oesophagostomum dentatum
OESDEN_00181
I
0.824
odr-7
Caenorhabditis elegans
WBGene00003854
D
0.837