CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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genemark-nMf.1.1.scaf00124-processed-gene-0.5
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
genemark-nMf.1.1.scaf00124-processed-gene-0.5
T308641_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
genemark-nMf.1.1.scaf00124-processed-gene-0.5-mRNA-1
Nuclear receptor
7
86
KKCKVCESKVNVCFHYGVCTCRACGAFFRRYIENEGECKYKCKCSQKQLLKENKNGKSQTNLAKCQKCRLQKCLSVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB008225
Biomphalaria glabrata
BGLB008225
N
estExt_fgenesh2_pg.C_630101
Branchiostoma floridae
estExt_fgenesh2_pg.C_630101
N
LotgiG139033
Lottia gigantea
LotgiG139033
N
LotgiG139049
Lottia gigantea
LotgiG139049
N