CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g19535
(
Steinernema carpocapsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L596_g19535
T308966_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g19535.t1
Nuclear receptor
10
80
VPCQICGDKSYGRHYGLWTCDGCSCFFKRSVRRNIQYSCISGDNACVIDKTRRNWCPACRLRKCFDMQMNK
Links
Other
Nuclear receptor
family TFs
Other
Steinernema carpocapsae
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00022p00217850
Amborella trichopoda
AMTR_s00022p00217850
I
0.000
Ciclev10028428m.g
Citrus clementina
Ciclev10028428m.g
I
0.000
estExt_gwp_gw1.C_1260170
Physcomitrella patens
estExt_gwp_gw1.C_1260170
N
0.000
fgenesh1_pm.scaffold_257000017
Physcomitrella patens
fgenesh1_pm.scaffold_257000017
N
0.000
gene03778-v1.0-hybrid
Fragaria vesca
gene03778-v1.0-hybrid
N
0.000
GLYMA02G30220
Glycine max
GLYMA02G30220
I
0.000
GLYMA10G11985
Glycine max
GLYMA10G11985
I
0.000
GLYMA12G30990
Glycine max
GLYMA12G30990
I
0.000
GRMZM2G133331
Zea mays
GRMZM2G133331
N
0.000
GSMUA_AchrUn_randomG12130_001
Musa acuminata
GSMUA_AchrUn_randomG12130_001
I
0.000
Lus10019543.g
Linum usitatissimum
Lus10019543.g
N
0.000
MTR_0126s0080
Medicago truncatula
MTR_0126s0080
I
0.000
orange1.1g036039m.g
Citrus sinensis
orange1.1g036039m.g
I
0.000
SELMODRAFT_231160
Selaginella moellendorffii
SELMODRAFT_231160
N
0.000
SELMODRAFT_231344
Selaginella moellendorffii
SELMODRAFT_231344
I
0.000