L893_g18997 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g18997 T309340_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.816 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g18997.t1 Nuclear receptor 14 84

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.801
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.861
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.894
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.775
CBG06599 Caenorhabditis briggsae CBG06599 I 0.811
CBG06609 Caenorhabditis briggsae CBG06609 I 0.811
CBG09567 Caenorhabditis briggsae CBG09567 I 0.849
CBG16982 Caenorhabditis briggsae CBG16982 I 0.822
CBG20727 Caenorhabditis briggsae CBG20727 I 0.769
CBG20729 Caenorhabditis briggsae CBG20729 I 0.750
CBG22870 Caenorhabditis briggsae CBG22870 I 0.774
CBN23838 Caenorhabditis brenneri CBN23838 I 0.753
CRE15644 Caenorhabditis remanei CRE15644 I 0.753
CRE15675 Caenorhabditis remanei CRE15675 I 0.828
CRE30948 Caenorhabditis remanei CRE30948 I 0.818
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.894
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.851
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.751
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.894
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.851
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.745
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.912
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.786
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.817
L889_g6692 Steinernema feltiae L889_g6692 I 0.789
L889_g6694 Steinernema feltiae L889_g6694 I 0.789
L889_g6696 Steinernema feltiae L889_g6696 I 0.856
L892_g14834 Steinernema scapterisci L892_g14834 N 0.939
L892_g2780 Steinernema scapterisci L892_g2780 I 0.786
L892_g2782 Steinernema scapterisci L892_g2782 I 0.931
L893_g18992 Steinernema glaseri L893_g18992 I 0.770
L893_g18993 Steinernema glaseri L893_g18993 I 0.759
L898_g3512 Steinernema monticolum L898_g3512 I 0.844
L898_g3515 Steinernema monticolum L898_g3515 I 0.776
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.751
Minc14668 Meloidogyne incognita Minc14668 I 0.773
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.901
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.780
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.816
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.850
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.761
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.869
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.918
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.777
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.759
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.816