CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-nMf.1.1.scaf08489-snap-gene-0.4
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf08489-snap-gene-0.4
T309582_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf08489-snap-gene-0.4-mRNA-1
Nuclear receptor
7
89
KQCKVCGSKEKVCFHYGVCTCRACGAFFRRYLENENKCIYSECTYKCSQKQLPNENKGKKSETNLAKCKKCRLEKCLSVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
STAT5A
Dasypus novemcinctus
ENSDNOG00000001465
N
ENSDNOG00000007398
Dasypus novemcinctus
ENSDNOG00000007398
N
STAT5B
Pteropus vampyrus
ENSPVAG00000003876
I