CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf08516-augustus-gene-0.5
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf08516-augustus-gene-0.5
T309583_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf08516-augustus-gene-0.5-mRNA-1
Nuclear receptor
7
85
KKCKVCECKENVCFHYGVCTCRACGAFFRRYLENEKKSKYNICKCLHKQMLLKESKIERNWEKCKKCRLDKCFSVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
salr
Drosophila melanogaster
FBgn0000287
N
GA18499
Drosophila pseudoobscura
FBgn0078501
N
GF14772
Drosophila ananassae
FBgn0091799
N
GG23720
Drosophila erecta
FBgn0115861
N
GH13393
Drosophila grimshawi
FBgn0120869
N
GI20716
Drosophila mojavensis
FBgn0143451
N
GM19017
Drosophila sechellia
FBgn0173920
N
GD23776
Drosophila simulans
FBgn0195148
N
GJ13301
Drosophila virilis
FBgn0200527
N
GK21060
Drosophila willistoni
FBgn0223052
N
GE18524
Drosophila yakuba
FBgn0235935
N
MDOA013256
Musca domestica
MDOA013256
N