CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf11243-snap-gene-0.6
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf11243-snap-gene-0.6
T309588_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf11243-snap-gene-0.6-mRNA-1
Nuclear receptor
7
89
KQCKVCGSKEKVCFHYGVCTCRACGAFFRRYLENENKCRYSECTYKCSQKQLLKENKGKKSETNLANCKKCRLEKCLSVGMKR
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10020374
Chelonia mydas
Cmyd_10020374
N
ZNF618
Loxodonta africana
ENSLAFG00000011286
N
ZNF618
Myotis lucifugus
ENSMLUG00000028634
N
Ogr04586
Ophisaurus gracilis
Ogr04586
N
Pvit_12232
Pogona vitticeps
Pvit_12232
N
znf618
Xenopus tropicalis
XB-GENE-6065985
N
znf618.S
Xenopus laevis
XB-GENE-6251558
N