MhA1_Contig1192.frz3.gene3 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig1192.frz3.gene3 T309623_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.863 0.500
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.788 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig1192.frz3.gene3 Nuclear receptor 40 109

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.901
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.885
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.986
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I 0.874
BXY_1091100 Bursaphelenchus xylophilus BXY_1091100 N 0.861
CBG06601 Caenorhabditis briggsae CBG06601 I 0.810
CBG06611 Caenorhabditis briggsae CBG06611 I 0.810
CBG09320 Caenorhabditis briggsae CBG09320 I 0.784
CBG09567 Caenorhabditis briggsae CBG09567 I 0.832
CBG20727 Caenorhabditis briggsae CBG20727 I 0.779
CBG20729 Caenorhabditis briggsae CBG20729 I 0.817
CBG22870 Caenorhabditis briggsae CBG22870 I 0.797
CBN13569 Caenorhabditis brenneri CBN13569 I 0.819
CBN21486 Caenorhabditis brenneri CBN21486 I 0.784
CBN23838 Caenorhabditis brenneri CBN23838 I 0.803
CBN28290 Caenorhabditis brenneri CBN28290 I 0.784
CJA09697 Caenorhabditis japonica CJA09697 I 0.826
CJA28065 Caenorhabditis japonica CJA28065 I 0.803
CRE08691 Caenorhabditis remanei CRE08691 I 0.835
CRE09011 Caenorhabditis remanei CRE09011 I 0.750
CRE15644 Caenorhabditis remanei CRE15644 I 0.803
CRE15675 Caenorhabditis remanei CRE15675 I 0.809
CRE18430 Caenorhabditis remanei CRE18430 I 0.810
CRE27865 Caenorhabditis remanei CRE27865 N 0.806
CRE30948 Caenorhabditis remanei CRE30948 I 0.860
CRE31070 Caenorhabditis remanei CRE31070 I 0.784
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.780
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.973
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.752
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.885
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.763
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.885
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.883
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.849
L889_g6696 Steinernema feltiae L889_g6696 I 0.877
L892_g14834 Steinernema scapterisci L892_g14834 N 0.869
L892_g2782 Steinernema scapterisci L892_g2782 I 0.855
L892_g8137 Steinernema scapterisci L892_g8137 N 0.831
L893_g18997 Steinernema glaseri L893_g18997 I 0.751
L893_g9516 Steinernema glaseri L893_g9516 N 0.787
L898_g12798 Steinernema monticolum L898_g12798 I 0.917
L898_g3512 Steinernema monticolum L898_g3512 I 0.871
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.973
Minc14668 Meloidogyne incognita Minc14668 I 0.989
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.893
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.852
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.766
PPA14290 Pristionchus pacificus PPA14290 I 0.808
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.875
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.773
SMUV_0000241501 Syphacia muris SMUV_0000241501 N 0.866
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.775
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.853
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.784
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.766
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.835
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.776
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.840
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.784
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.863
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.829
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.788