CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig1462.frz3.gene15
(
Meloidogyne hapla
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
MhA1_Contig1462.frz3.gene15
T309629_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-84
M02414_2.00
Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN
PBM
Weirauch et al.(2014)
pTH5828
0.775
0.500
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig1462.frz3.gene15
Nuclear receptor
30
100
RICSICSGPSNGFYFGVLSCRACASFYRRSALEKRKFLCRRFNNCNIIADGMRNSCRACRLRRCLEAGMDI
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne hapla
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01819
Capronia coronata
A1O1_01819
I
A1O3_00396
Capronia epimyces
A1O3_00396
I
A1O5_01110
Cladophialophora psammophila
A1O5_01110
I
A1O7_04704
Cladophialophora yegresii
A1O7_04704
I
A1O9_01846
Exophiala aquamarina
A1O9_01846
I
ARB_06946
Arthroderma benhamiae
ARB_06946
I
BDDG_08856
Blastomyces dermatitidis
BDDG_08856
I
ACLA_002460
Aspergillus clavatus
CADACLAG00000308
I
CADAFLAG00010556
Aspergillus flavus
CADAFLAG00010556
I
AFUA_5G02690
Aspergillus fumigatus
CADAFUAG00002913
I
CADANGAG00002516
Aspergillus niger
CADANGAG00002516
I
ANIA_08125
Aspergillus nidulans
CADANIAG00004158
D
CADAORAG00009712
Aspergillus oryzae
CADAORAG00009712
I
ATEG_09236
Aspergillus terreus
CADATEAG00001412
I
NFIA_039400
Neosartorya fischeri
CADNFIAG00003283
I
CIMG_06468
Coccidioides immitis
CIMG_06468
I
CPC735_029590
Coccidioides posadasii
CPC735_029590
I
EURHEDRAFT_520686
Aspergillus ruber
EURHEDRAFT_520686
I
fgenesh1_pg.00866_#_590
Aspergillus carbonarius
fgenesh1_pg.00866_#_590
I
G647_03978
Cladophialophora carrionii
G647_03978
I
H101_02186
Trichophyton interdigitale
H101_02186
I
H102_04486
Trichophyton rubrum
H102_04486
I
H105_04510
Trichophyton soudanense
H105_04510
I
HCBG_06419
Histoplasma capsulatum
HCBG_06419
I
HMPREF1120_03270
Exophiala dermatitidis
HMPREF1120_03270
I
HMPREF1541_08621
Cyphellophora europaea
HMPREF1541_08621
N
MCYG_06710
Arthroderma otae
MCYG_06710
I
MCYG_06710
Microsporum canis
MCYG_06710
I
MGYG_03929
Microsporum gypseum
MGYG_03929
I
PAAG_12364
Paracoccidioides sp lutzii
PAAG_12364
I
PABG_05434
Paracoccidioides brasiliensis
PABG_05434
I
Pc21g15300
Penicillium chrysogenum
Pc21g15300
I
PCH_Pc21g15300
Penicillium rubens
PCH_Pc21g15300
I
PDE_09881
Penicillium oxalicum
PDE_09881
I
PDIP_48430
Penicillium digitatum
PDIP_48430
I
PEX1_053360
Penicillium expansum
PEX1_053360
I
PITC_049470
Penicillium italicum
PITC_049470
I
PMAA_058600
Talaromyces marneffei
PMAA_058600
I
PMAA_058600
Penicillium marneffei
PMAA_058600
I
PMAA_080950
Penicillium marneffei
PMAA_080950
I
PMAA_080950
Talaromyces marneffei
PMAA_080950
I
PV04_04557
Capronia semiimmersa
PV04_04557
I
PV05_02224
Exophiala xenobiotica
PV05_02224
I
PV06_06348
Exophiala oligosperma
PV06_06348
I
PV07_05656
Cladophialophora immunda
PV07_05656
I
PV08_08649
Exophiala spinifera
PV08_08649
I
PV10_03900
Exophiala mesophila
PV10_03900
I
PVAR5_0633
Byssochlamys spectabilis
PVAR5_0633
I
TEQG_04271
Trichophyton equinum
TEQG_04271
I
TESG_00349
Trichophyton tonsurans
TESG_00349
I
TRV_05915
Trichophyton verrucosum
TRV_05915
I
TSTA_115520
Talaromyces stipitatus
TSTA_115520
I
U727_00430462281
Penicillium solitum
U727_00430462281
I
UREG_03950
Uncinocarpus reesii
UREG_03950
I
Z517_06543
Fonsecaea pedrosoi
Z517_06543
I
Z518_00867
Rhinocladiella mackenziei
Z518_00867
I
Z519_08384
Cladophialophora bantiana
Z519_08384
I