SSTP_0000217700 (Strongyloides stercoralis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SSTP_0000217700 T310579_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.891 0.629
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.789 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSTP_0000217700.1 Nuclear receptor 103 172

Links

Other Nuclear receptor family TFs
Other Strongyloides stercoralis TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29797.m000353 Ricinus communis 29797.m000353 N 0.000
Aquca_015_00469 Aquilegia coerulea Aquca_015_00469 N 0.000
anac036 Arabidopsis thaliana AT2G17040 N 0.000
Bo3g092020 Brassica oleracea Bo3g092020 N 0.000
Bo7g015050 Brassica oleracea Bo7g015050 N 0.000
Bo9g024360 Brassica oleracea Bo9g024360 N 0.000
Bostr.18351s0165 Boechera stricta Bostr.18351s0165 N 0.000
Bra002018 Brassica rapa Bra002018 N 0.000
Bra013034 Brassica rapa Bra013034 N 0.000
Bra037283 Brassica rapa Bra037283 N 0.000
Cagra.0805s0005 Capsella grandiflora Cagra.0805s0005 N 0.000
Carubv10014350m.g Capsella rubella Carubv10014350m.g N 0.000
cassava13355.valid.m1 Manihot esculenta cassava13355.valid.m1 N 0.000
cassava23439.valid.m1 Manihot esculenta cassava23439.valid.m1 I 0.000
cassava30341.valid.m1 Manihot esculenta cassava30341.valid.m1 N 0.000
Ca_11128 Cicer arietinum Ca_11128 N 0.000
chr3.CM0460.350.nd Lotus japonicus chr3.CM0460.350.nd N 0.000
Ciclev10029007m.g Citrus clementina Ciclev10029007m.g N 0.000
Cla007018 Citrullus lanatus Cla007018 N 0.000
Cucsa.119310 Cucumis sativus Cucsa.119310 N 0.000
Eucgr.I01494 Eucalyptus grandis Eucgr.I01494 N 0.000
evm.TU.supercontig_320.2 Carica papaya evm.TU.supercontig_320.2 N 0.000
anac036 Arabidopsis lyrata fgenesh2_kg.3__3291__AT2G17040.1 N 0.000
gene17203-v1.0-hybrid Fragaria vesca gene17203-v1.0-hybrid N 0.000
GLYMA11G10230 Glycine max GLYMA11G10230 N 0.000
GLYMA12G02540 Glycine max GLYMA12G02540 N 0.000
Gorai.002G001900 Gossypium raimondii Gorai.002G001900 N 0.000
Gorai.003G003900 Gossypium raimondii Gorai.003G003900 N 0.000
Gorai.005G257800 Gossypium raimondii Gorai.005G257800 N 0.000
Gorai.008G038800 Gossypium raimondii Gorai.008G038800 N 0.000
Lus10003333.g Linum usitatissimum Lus10003333.g N 0.000
Lus10022636.g Linum usitatissimum Lus10022636.g N 0.000
MDP0000480581 Malus domestica MDP0000480581 N 0.000
MDP0000868556 Malus domestica MDP0000868556 N 0.000
mgf013168m Mimulus guttatus mgf013168m N 0.000
MTR_4g075980 Medicago truncatula MTR_4g075980 N 0.000
orange1.1g023427m.g Citrus sinensis orange1.1g023427m.g N 0.000
Pavir.Ia04458 Panicum virgatum Pavir.Ia04458 N 0.000
Pavir.J24394 Panicum virgatum Pavir.J24394 N 0.000
Pm020961 Prunus mume Pm020961 N 0.000
POPTR_0004s18860 Populus trichocarpa POPTR_0004s18860 N 0.000
POPTR_0009s14370 Populus trichocarpa POPTR_0009s14370 N 0.000
PRUPE_ppa009455mg Prunus persica PRUPE_ppa009455mg N 0.000
SapurV1A.0080s0480 Salix purpurea SapurV1A.0080s0480 N 0.000
SapurV1A.0218s0020 Salix purpurea SapurV1A.0218s0020 N 0.000
SapurV1A.0958s0170 Salix purpurea SapurV1A.0958s0170 I 0.000
Si036757m.g Setaria italica Si036757m.g N 0.000
Thhalv10022800m.g Eutrema salsugineum Thhalv10022800m.g N 0.000
anac036 Vitis vinifera VIT_03s0038g03410 N 0.000
VIT_04s0008g00150 Vitis vinifera VIT_04s0008g00150 N 0.000