ENSGACG00000007469 (Gasterosteus aculeatus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSGACG00000007469 T313556_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGACG00000007469
M02432_2.00		 Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.864 0.864
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.864 0.864
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.841 0.841
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.841 0.841
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02432_2.00 Pipsqueak 52 96

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000009917 Pipsqueak 494 538

Links

Other Pipsqueak family TFs
Other Gasterosteus aculeatus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006442 Aedes aegypti AAEL006442 N
AALB000181 Anopheles albimanus AALB000181 N
AATE009647 Anopheles atroparvus AATE009647 N
AATE014909 Anopheles atroparvus AATE014909 N
ACEP20625 Atta cephalotes ACEP20625 N
ACOM030314 Anopheles coluzzii ACOM030314 N
ACUA008223 Anopheles culicifacies ACUA008223 N
ACYPI008472 Acyrthosiphon pisum ACYPI008472 N
ADAC002219 Anopheles darlingi ADAC002219 N
ADIR006376 Anopheles dirus ADIR006376 N
AFAF015060 Anopheles farauti AFAF015060 N
AFUN010904 Anopheles funestus AFUN010904 N
AGAP008230 Anopheles gambiae AGAP008230 N
AMAM003525 Anopheles maculatus AMAM003525 N
AMAM010681 Anopheles maculatus AMAM010681 N
AMEM000477 Anopheles merus AMEM000477 N
ANCCEY_03889 Ancylostoma ceylanicum ANCCEY_03889 N
ANCDUO_04811 Ancylostoma duodenale ANCDUO_04811 N
AQUA010556 Anopheles quadriannulatus AQUA010556 N
ASIS020914 Anopheles sinensis ASIS020914 N
CLEC004692 Cimex lectularius CLEC004692 N
Cmyd_10015925 Chelonia mydas Cmyd_10015925 N
CPIJ009409 Culex quinquefasciatus CPIJ009409 N
CpipJ_CPIJ009409 Culex pipiens CpipJ_CPIJ009409 N
D917_07104 Trichinella nativa D917_07104 N
D918_00910 Trichuris suis D918_00910 N
DAPPUDRAFT_7670 Daphnia pulex DAPPUDRAFT_7670 N
EFV51761 Trichinella spiralis EFV51761 N
ENSCJAG00000002653 Callithrix jacchus ENSCJAG00000002653 N
ENSSTOG00000023479 Ictidomys tridecemlineatus ENSSTOG00000023479 N
EVEC_0001319001 Enterobius vermicularis EVEC_0001319001 N
CG10348 Drosophila melanogaster FBgn0032707 N
ham Drosophila melanogaster FBgn0045852 N
GA10264 Drosophila pseudoobscura FBgn0070322 N
GF14489 Drosophila ananassae FBgn0091516 N
GG21686 Drosophila erecta FBgn0113864 N
GH11201 Drosophila grimshawi FBgn0118682 N
GI18122 Drosophila mojavensis FBgn0140862 N
GI18124 Drosophila mojavensis FBgn0140864 N
GL18694 Drosophila persimilis FBgn0156295 N
GM17064 Drosophila sechellia FBgn0171976 N
GJ17748 Drosophila virilis FBgn0204917 N
GK15538 Drosophila willistoni FBgn0217543 N
GE12710 Drosophila yakuba FBgn0230434 N
GB53689 Apis mellifera GB53689 N
GPLIN_000816800 Globodera pallida GPLIN_000816800 N
HMEL002495 Heliconius melpomene HMEL002495 N
KGM_07336 Danaus plexippus KGM_07336 N
LCUP013771 Lucilia cuprina LCUP013771 N
LDEC009263 Leptinotarsa decemlineata LDEC009263 N
LLOJ003763 Lutzomyia longipalpis LLOJ003763 N
LLOJ003850 Lutzomyia longipalpis LLOJ003850 N
LOAG_01298 Loa loa LOAG_01298 N
MCINX008948 Melitaea cinxia MCINX008948 N
MDOA001127 Musca domestica MDOA001127 N
Myotis_brandtii_Prdm16_10023972 Myotis brandtii Myotis_brandtii_Prdm16_10023972 N
nAv.1.0.1.g10331 Acanthocheilonema viteae nAv.1.0.1.g10331 N
nLs.2.1.2.g06419 Litomosoides sigmodontis nLs.2.1.2.g06419 N
nRc.2.0.1.g25507 Romanomermis culicivorax nRc.2.0.1.g25507 N
NV11691 Nasonia vitripennis NV11691 N
Ocbimv22023510m.g Octopus bimaculoides Ocbimv22023510m.g N
OESDEN_18342 Oesophagostomum dentatum OESDEN_18342 N
PHUM496080 Pediculus humanus PHUM496080 N
PPAI005885 Phlebotomus papatasi PPAI005885 N
PPAI005886 Phlebotomus papatasi PPAI005886 N
SBAD_0000285901 Soboliphyme baturini SBAD_0000285901 N
SINV18128 Solenopsis invicta SINV18128 N
SMUV_0000946701 Syphacia muris SMUV_0000946701 N
TC006419 Tribolium castaneum TC006419 N
TMUE_s0068003800 Trichuris muris TMUE_s0068003800 N
TTRE_0000709701 Trichuris trichiura TTRE_0000709701 N
WUBG_02748 Wuchereria bancrofti WUBG_02748 N
YQE_05795 Dendroctonus ponderosae YQE_05795 N
YQE_05797 Dendroctonus ponderosae YQE_05797 N