CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000470901
(
Trichuris trichiura
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
TTRE_0000470901
T315180_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000470901
Pipsqueak
42
83
SKEDLEAAVLDIRSGRLGTRRASVIYGVPRSTLRNKIHKLEV
TTRE_0000470901
Pipsqueak
184
227
DKNALALAVQSVRRGEMSVHKAGSFYGVPHSTLEYKVKERNLLR
Links
Other
Pipsqueak
family TFs
Other
Trichuris trichiura
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr3.CM0106.670.nc
Lotus japonicus
chr3.CM0106.670.nc
N
Gorai.011G138900
Gossypium raimondii
Gorai.011G138900
N
MTR_2g099155
Medicago truncatula
MTR_2g099155
N
TCM_019960
Theobroma cacao
TCM_019960
N
TCM_019968
Theobroma cacao
TCM_019968
N