CpipJ_CPIJ002469 (Culex pipiens)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 CpipJ_CPIJ002469 T316955_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dl
M02712_2.00 		Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS		 SELEX
Mathelier et al.(2014)
MA0022.1 		0.799 0.799
dl
M02713_2.00 		Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC		 SELEX
Mathelier et al.(2014)
MA0023.1 		0.799 0.799
dl
M09691_2.00 		Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV		 Misc
Kulakovskiy et al.(2009)
dl 		0.799 0.799
dl
M11243_2.00 		Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC		 Transfac
Matys et al.(2006)
I$DL_01 		0.799 0.799
dl
M11244_2.00 		Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV		 Transfac
Matys et al.(2006)
I$DL_02 		0.799 0.799
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ002469-RA Rel 11 181

Links

Other Rel family TFs
Other Culex pipiens TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29900.m001610 Ricinus communis 29900.m001610 I 0.000
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.000
Aquca_045_00168 Aquilegia coerulea Aquca_045_00168 N 0.000
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.000
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.000
Bostr.20505s0075 Boechera stricta Bostr.20505s0075 N 0.000
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.000
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.000
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.000
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.000
Cla019977 Citrullus lanatus Cla019977 I 0.000
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.000
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.000
Eucgr.K01103 Eucalyptus grandis Eucgr.K01103 N 0.000
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.000
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.000
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.000
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.000
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.000
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.000
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.000
GSMUA_Achr10G14370_001 Musa acuminata GSMUA_Achr10G14370_001 N 0.000
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.000
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.000
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.000
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.000
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.000
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.000
MDP0000249969 Malus domestica MDP0000249969 I 0.000
MDP0000256492 Malus domestica MDP0000256492 N 0.000
mgf022146m Mimulus guttatus mgf022146m N 0.000
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.000
OB01G17480 Oryza brachyantha OB01G17480 I 0.000
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.000
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.000
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.000
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.000
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.000
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.000
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.000
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.000
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.000
OS01G0218100 Oryza sativa OS01G0218100 I 0.000
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.000
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.000
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I 0.000
PK20225.1 Cannabis sativa PK20225.1 D 0.000
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.000
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.000
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.000
Si002517m.g Setaria italica Si002517m.g I 0.000
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I 0.000
TCM_029711 Theobroma cacao TCM_029711 I 0.000
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.000
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.000