CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000014415
(
Chlorocebus sabaeus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSCSAG00000014415
T317091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.962
0.962
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.962
0.962
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.962
0.962
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.962
0.962
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.910
0.910
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000010543
Rel
10
142
ISPFFQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIISRIKAGINPFNVPEKQLNDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
Links
Other
Rel
family TFs
Other
Chlorocebus sabaeus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_03775
Schistosoma haematobium
A_03775
N
0.000
csin105162
Clonorchis sinensis
csin105162
N
0.000
ECANG7_02014
Echinococcus canadensis
ECANG7_02014
N
0.000
EmuJ_001054200
Echinococcus multilocularis
EmuJ_001054200
N
0.000
ENSONIG00000004109
Oreochromis niloticus
ENSONIG00000004109
I
0.000
ENSORLG00000011834
Oryzias latipes
ENSORLG00000011834
I
0.000
ENSPFOG00000002285
Poecilia formosa
ENSPFOG00000002285
I
0.000
ENSPMAG00000000489
Petromyzon marinus
ENSPMAG00000000489
I
0.000
HDID_0000518601
Hymenolepis diminuta
HDID_0000518601
N
0.000
HmN_000552800
Hymenolepis microstoma
HmN_000552800
N
0.000
HNAJ_0001138301
Hymenolepis nana
HNAJ_0001138301
N
0.000
SCUD_0002067401
Schistosoma curassoni
SCUD_0002067401
N
0.000
Sjc_0068210
Schistosoma japonicum
Sjc_0068210
N
0.000
Smp_085910
Schistosoma mansoni
Smp_085910
N
0.000
T265_11677
Opisthorchis viverrini
T265_11677
N
0.000
TASK_0000169301
Taenia asiatica
TASK_0000169301
N
0.000
TsM_001161100
Taenia solium
TsM_001161100
N
0.000
TTAC_0000253501
Hydatigera taeniaeformis
TTAC_0000253501
N
0.000