Pvit_18473 (Pogona vitticeps)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Pvit_18473 T317821_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RELB
M08161_2.00 		Homo sapiens
NNATTCCCCNN
NNGGGGAATNN		 ChIP-seq
Mathelier et al.(2014)
MA1117.1 		0.765 0.765
RELB
M09347_2.00 		Homo sapiens
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C 		0.765 0.765
RELB
M11227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELBP50_Q3 		0.765 0.765
Relb
M09352_2.00 		Mus musculus
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C 		0.759 0.759
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18473 Rel 137 305

Links

Other Rel family TFs
Other Pogona vitticeps TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N 0.000
M407DRAFT_26637 Tulasnella calospora M407DRAFT_26637 N 0.000
M407DRAFT_26638 Tulasnella calospora M407DRAFT_26638 N 0.000
M407DRAFT_33253 Tulasnella calospora M407DRAFT_33253 N 0.000
Phatr3_EG02471 Phaeodactylum tricornutum Phatr3_EG02471 N 0.000
Phatr3_J45560 Phaeodactylum tricornutum Phatr3_J45560 I 0.000
Thaps263978 Thalassiosira pseudonana Thaps263978 N 0.000
Thaps264036 Thalassiosira pseudonana Thaps264036 N 0.000
Thaps3698 Thalassiosira pseudonana Thaps3698 N 0.000