CC1G_00311 (Coprinopsis cinerea)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 CC1G_00311 T318058_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.653 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.653 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.653 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.653 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.653 0.430
XP_002157607.1
M02456_2.00 		Hydra magnipapillata
GTHDYYDNVN
NBNHRRHDAC		 PBM
Weirauch et al.(2014)
pTH9199 		0.652 0.468
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EAU84792 RFX 190 268

Links

Other RFX family TFs
Other Coprinopsis cinerea TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.656
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.653
A1O1_08600 Capronia coronata A1O1_08600 I 0.650
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.650
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.663
AALB009562 Anopheles albimanus AALB009562 I 0.651
Aan_R008768 Calypte anna Aan_R008768 I 0.651
AARA009842 Anopheles arabiensis AARA009842 I 0.651
AATE005561 Anopheles atroparvus AATE005561 I 0.651
ACHR008029 Anopheles christyi ACHR008029 I 0.651
ACOM024072 Anopheles coluzzii ACOM024072 I 0.651
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.654
ADAC010162 Anopheles darlingi ADAC010162 I 0.651
AEPI007296 Anopheles epiroticus AEPI007296 I 0.651
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.780
AGAP003943 Anopheles gambiae AGAP003943 I 0.651
AMEC012572 Anopheles melas AMEC012572 I 0.651
AMEM012406 Anopheles merus AMEM012406 I 0.651
AQUA009139 Anopheles quadriannulatus AQUA009139 I 0.651
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.654
BGLB002482 Biomphalaria glabrata BGLB002482 I 0.651
BN946_scf184858.g55 Trametes cinnabarina BN946_scf184858.g55 I 0.777
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.772
Brh_R000260 Buceros rhinoceros Brh_R000260 I 0.651
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.651
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.651
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.651
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.651
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.651
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.651
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.651
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.651
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.654
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.659
CERSUDRAFT_149026 Ceriporiopsis subvermispora CERSUDRAFT_149026 I 0.775
Cmyd_10003770 Chelonia mydas Cmyd_10003770 I 0.651
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.780
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.759
DICSQDRAFT_106385 Dichomitus squalens DICSQDRAFT_106385 I 0.777
E5Q_03025 Mixia osmundae E5Q_03025 I 0.701
E5Q_03026 Mixia osmundae E5Q_03026 I 0.701
ECPE_0000690401 Echinostoma caproni ECPE_0000690401 I 0.653
EFV54486 Trichinella spiralis EFV54486 I 0.652
rfx1b Danio rerio ENSDARG00000075904 I 0.651
ENSSSCG00000023544 Sus scrofa ENSSSCG00000023544 I 0.653
rfx2 Takifugu rubripes ENSTRUG00000008788 I 0.651
estExt_fgenesh2_pg.C_4710022 Branchiostoma floridae estExt_fgenesh2_pg.C_4710022 I 0.654
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.651
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.780
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.651
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.651
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.780
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.700
FIBRA_04592 Fibroporia radiculosa FIBRA_04592 I 0.773
FOMPIDRAFT_1038544 Fomitopsis pinicola FOMPIDRAFT_1038544 I 0.780
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.780
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.779
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.653
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.653
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.667
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.654
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.652
HelroG82191 Helobdella robusta HelroG82191 I 0.654
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.780
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.650
ISCW009030 Ixodes scapularis ISCW009030 I 0.650
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.779
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.780
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.652
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.780
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.651
LDEC011807 Leptinotarsa decemlineata LDEC011807 I 0.651
LLOJ001292 Lutzomyia longipalpis LLOJ001292 I 0.653
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.780
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.778
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.772
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.755
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.780
MDOA009119 Musca domestica MDOA009119 I 0.652
ML02801a Mnemiopsis leidyi ML02801a I 0.651
Moror_7356 Moniliophthora roreri Moror_7356 N 0.775
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.674
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.651
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.653
NERG_01713 Nematocida sp NERG_01713 I 0.656
O9G_004738 Rozella allomycis O9G_004738 I 0.665
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.651
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.651
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.653
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.775
PDE_02161 Penicillium oxalicum PDE_02161 I 0.650
PGTG_11391 Puccinia graminis PGTG_11391 I 0.730
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.780
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.780
PHSY_002871 Pseudozyma hubeiensis PHSY_002871 N 0.651
PIIN_08876 Piriformospora indica PIIN_08876 N 0.760
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.780
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.778
PLEOSDRAFT_1038101 Pleurotus ostreatus PLEOSDRAFT_1038101 I 0.776
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.651
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.651
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.663
PPAI005117 Phlebotomus papatasi PPAI005117 I 0.653
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.663
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.663
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.652
PTTG_01668 Puccinia triticina PTTG_01668 I 0.711
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.650
PV06_00023 Exophiala oligosperma PV06_00023 I 0.650
PV08_04071 Exophiala spinifera PV08_04071 I 0.650
PV09_00065 Verruconis gallopava PV09_00065 I 0.653
PV10_05596 Exophiala mesophila PV10_05596 I 0.650
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.652
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.651
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.780
SCLCIDRAFT_138144 Scleroderma citrinum SCLCIDRAFT_138144 I 0.778
SCUD_0002149801 Schistosoma curassoni SCUD_0002149801 N 0.652
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.780
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.658
SMTD_0001942901 Schistosoma mattheei SMTD_0001942901 N 0.652
SMU15029830 Schmidtea mediterranea SMU15029830 I 0.652
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.651
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.657
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.666
sr13205 Sporisorium reilianum sr13205 N 0.651
SROB_0002099101 Schistosoma rodhaini SROB_0002099101 N 0.652
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.655
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.659
THITE_2107553 Thielavia terrestris THITE_2107553 I 0.651
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.651
UHOR_03310 Ustilago hordei UHOR_03310 N 0.651
V565_046180 Rhizoctonia solani V565_046180 N 0.766
XP_002157607.1 Hydra magnipapillata XP_002157607.1 D 0.652
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.653
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.656
RFX1 Saccharomyces cerevisiae YLR176C D 0.653
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.650
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.653
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.653
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.656