LALA0_S03e09428g (Lachancea lanzarotensis)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 LALA0_S03e09428g T318667_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.727 0.747
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.727 0.747
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.727 0.747
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.727 0.747
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.727 0.747
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEP61723 RFX 377 455

Links

Other RFX family TFs
Other Lachancea lanzarotensis TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB10294.1 Alternaria brassicicola AB10294.1 I 0.000
AOL_s00006g157 Arthrobotrys oligospora AOL_s00006g157 I 0.000
Bcin11g00730 Botrytis cinerea Bcin11g00730 I 0.000
BGHDH14_bgh03873 Blumeria graminis BGHDH14_bgh03873 I 0.000
COCC4DRAFT_20732 Bipolaris maydis COCC4DRAFT_20732 I 0.000
COCCADRAFT_39951 Bipolaris zeicola COCCADRAFT_39951 I 0.000
COCMIDRAFT_35015 Bipolaris oryzae COCMIDRAFT_35015 I 0.000
COCSADRAFT_103706 Bipolaris sorokiniana COCSADRAFT_103706 I 0.000
COCVIDRAFT_32043 Bipolaris victoriae COCVIDRAFT_32043 I 0.000
CTHT_0009920 Chaetomium thermophilum CTHT_0009920 I 0.000
DRE_02170 Drechslerella stenobrocha DRE_02170 I 0.000
estExt_fgenesh1_pg.C_60367 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_60367 I 0.000
estExt_Genewise1.C_21713 Neurospora discreta estExt_Genewise1.C_21713 I 0.000
EV44_g5959 Erysiphe necator EV44_g5959 I 0.000
fgenesh1_pg.sca_1_chr1_3_0000074 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000074 I 0.000
H072_5364 Dactylellina haptotyla H072_5364 I 0.000
M7I_1571 Glarea lozoyensis M7I_1571 I 0.000
MAC_07140 Metarhizium acridum MAC_07140 I 0.000
MAJ_04550 Metarhizium majus MAJ_04550 I 0.000
MANI_013624 Metarhizium anisopliae MANI_013624 I 0.000
MBM_05926 Marssonina brunnea MBM_05926 I 0.000
MBR_06038 Metarhizium brunneum MBR_06038 I 0.000
NCU02724 Neurospora crassa NCU02724 D 0.000
NechaG74463 Fusarium solani NechaG74463 I 0.000
NEUTE1DRAFT_126349 Neurospora tetrasperma NEUTE1DRAFT_126349 I 0.000
OIDMADRAFT_121959 Oidiodendron maius OIDMADRAFT_121959 I 0.000
PTRG_11389 Pyrenophora triticirepentis PTRG_11389 I 0.000
PTT_08645 Pyrenophora teres PTT_08645 I 0.000
S40285_05978 Stachybotrys chlorohalonata S40285_05978 I 0.000
S40288_06808 Stachybotrys chartarum S40288_06808 I 0.000
SBOR_9785 Sclerotinia borealis SBOR_9785 I 0.000
SETTUDRAFT_141598 Setosphaeria turcica SETTUDRAFT_141598 I 0.000
SMAC_04294 Sordaria macrospora SMAC_04294 I 0.000
SS1G_14446 Sclerotinia sclerotiorum SS1G_14446 I 0.000
UV8b_2201 Ustilaginoidea virens UV8b_2201 I 0.000
X797_005794 Metarhizium robertsii X797_005794 I 0.000