CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Kwal_214
(
Kluyveromyces waltii
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
Kwal_214
T319100_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RFX1
M00066_2.00
Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN
PBM
Badis et al.(2008)
RFX1_4537
0.736
0.769
RFX1
M07494_2.00
Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1
0.736
0.769
RFX1
M08600_2.00
Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG
Misc
DeBoer et al.(2011)
YLR176C_1478
0.736
0.769
RFX1
M08601_2.00
Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV
Misc
DeBoer et al.(2011)
YLR176C_496
0.736
0.769
RFX1
M11251_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RFX1_02
0.736
0.769
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Kwal_214
RFX
270
347
QVYALTWLMNTCVEEKNSFVPRGRIFAQYAACCAQNNLKPLSQATLGKLIRTIFPDLTTRRLGMRGQSKYHYCGLNLI
Links
Other
RFX
family TFs
Other
Kluyveromyces waltii
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
14959_Multiple
Saccharomyces mikatae
14959_Multiple
I
0.736
16177_Multiple
Saccharomyces paradoxus
16177_Multiple
I
0.736
A1O1_08600
Capronia coronata
A1O1_08600
I
0.675
A1O3_08026
Capronia epimyces
A1O3_08026
I
0.675
A1O5_04383
Cladophialophora psammophila
A1O5_04383
I
0.675
A1O7_03561
Cladophialophora yegresii
A1O7_03561
I
0.676
A1O9_03272
Exophiala aquamarina
A1O9_03272
I
0.675
AACERI_AaceriAAL010W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAL010W
I
0.739
AB07822.1
Alternaria brassicicola
AB07822.1
I
0.670
ACRE_029400
Acremonium chrysogenum
ACRE_029400
I
0.688
AGOS_AAL010W
Ashbya gossypii
AGOS_AAL010W
I
0.739
AOL_s00215g602
Arthrobotrys oligospora
AOL_s00215g602
I
0.674
ARB_07111
Arthroderma benhamiae
ARB_07111
I
0.669
AUEXF2481DRAFT_78728
Aureobasidium subglaciale
AUEXF2481DRAFT_78728
I
0.670
BAUCODRAFT_23427
Baudoinia compniacensis
BAUCODRAFT_23427
I
0.668
BBA_07182
Beauveria bassiana
BBA_07182
I
0.676
Bcin03g02360
Botrytis cinerea
Bcin03g02360
I
0.666
BDDG_02784
Blastomyces dermatitidis
BDDG_02784
I
0.668
BGHDH14_bgh05888
Blumeria graminis
BGHDH14_bgh05888
I
0.653
BN7_2967
Wickerhamomyces ciferrii
BN7_2967
I
0.696
ACLA_009440
Aspergillus clavatus
CADACLAG00001004
I
0.668
CADAFLAG00010851
Aspergillus flavus
CADAFLAG00010851
I
0.668
AFUA_5G06120
Aspergillus fumigatus
CADAFUAG00006202
I
0.668
CADANGAG00013568
Aspergillus niger
CADANGAG00013568
I
0.668
ANIA_02296
Aspergillus nidulans
CADANIAG00008989
I
0.668
CADAORAG00004061
Aspergillus oryzae
CADAORAG00004061
I
0.668
ATEG_09416
Aspergillus terreus
CADATEAG00008983
I
0.668
NFIA_036980
Neosartorya fischeri
CADNFIAG00003299
I
0.668
CAGL0B04895g
Candida glabrata
CAGL0B04895g
I
0.727
CAGL0H03751g
Candida glabrata
CAGL0H03751g
I
0.722
CaO19.11346
Candida albicans
CaO19.11346
I
0.684
CaO19.3865
Candida albicans
CaO19.3865
I
0.684
CAOG_00356
Capsaspora owczarzaki
CAOG_00356
I
0.668
CCM_03895
Cordyceps militaris
CCM_03895
I
0.674
CD36_31600
Candida dubliniensis
CD36_31600
I
0.681
CFIO01_07583
Colletotrichum fioriniae
CFIO01_07583
I
0.676
CGGC5_15149
Colletotrichum gloeosporioides
CGGC5_15149
I
0.675
CGI_10016120
Crassostrea gigas
CGI_10016120
I
0.656
CH063_09103
Colletotrichum higginsianum
CH063_09103
I
0.676
CIMG_05985
Coccidioides immitis
CIMG_05985
I
0.669
CLUG_05348
Candida lusitaniae
CLUG_05348
I
0.665
CLUG_05348
Clavispora lusitaniae
CLUG_05348
I
0.665
CMQ_5960
Grosmannia clavigera
CMQ_5960
I
0.673
Cob_11986
Colletotrichum orbiculare
Cob_11986
I
0.678
COCC4DRAFT_162970
Bipolaris maydis
COCC4DRAFT_162970
I
0.671
COCCADRAFT_29061
Bipolaris zeicola
COCCADRAFT_29061
I
0.671
COCMIDRAFT_23254
Bipolaris oryzae
COCMIDRAFT_23254
I
0.671
COCSADRAFT_34318
Bipolaris sorokiniana
COCSADRAFT_34318
I
0.671
COCVIDRAFT_40879
Bipolaris victoriae
COCVIDRAFT_40879
I
0.671
CORT_0D05100
Candida orthopsilosis
CORT_0D05100
I
0.678
CPAG_04140
Candida parapsilosis
CPAG_04140
I
0.678
CPC735_025690
Coccidioides posadasii
CPC735_025690
I
0.669
CPUR_03868
Claviceps purpurea
CPUR_03868
I
0.675
CSUB01_01029
Colletotrichum sublineola
CSUB01_01029
I
0.677
CTHT_0028340
Chaetomium thermophilum
CTHT_0028340
I
0.669
CTRG_00624
Candida tropicalis
CTRG_00624
I
0.676
D918_02290
Trichuris suis
D918_02290
I
0.660
DEHA2G10868g
Debaryomyces hansenii
DEHA2G10868g
I
0.702
DOTSEDRAFT_132769
Dothistroma septosporum
DOTSEDRAFT_132769
I
0.667
DRE_06212
Drechslerella stenobrocha
DRE_06212
I
0.674
ENSCING00000022532
Ciona intestinalis
ENSCING00000022532
I
0.655
EPUS_04947
Endocarpon pusillum
EPUS_04947
I
0.676
estExt_fgenesh1_pg.C_chr_80140
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_80140
I
0.669
estExt_fgenesh2_pg.C_10713
Neurospora discreta
estExt_fgenesh2_pg.C_10713
I
0.676
estExt_genewise1_worm.C_chr_6.10133
Pichia stipitis
estExt_genewise1_worm.C_chr_6.10133
I
0.690
EURHEDRAFT_516724
Aspergillus ruber
EURHEDRAFT_516724
I
0.668
EV44_g5273
Erysiphe necator
EV44_g5273
I
0.670
e_gw1.6.922.1
Nectria haematococca
e_gw1.6.922.1
I
0.678
F503_07504
Ophiostoma piceae uamh
F503_07504
I
0.672
FFUJ_02499
Fusarium fujikuroi
FFUJ_02499
I
0.670
fgenesh1_pg.00162_#_176
Aspergillus carbonarius
fgenesh1_pg.00162_#_176
I
0.668
fgenesh1_pg.C_scaffold_1001176
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_1001176
I
0.673
fgeneshMC_pg.6_#_740
Mucor circinelloides
fgeneshMC_pg.6_#_740
I
0.666
FGRRES_07420
Fusarium graminearum
FGRRES_07420
I
0.671
FOXG_01471
Fusarium oxysporum
FOXG_01471
I
0.670
FPSE_09383
Fusarium pseudograminearum
FPSE_09383
I
0.659
FVEG_07837
Fusarium verticillioides
FVEG_07837
I
0.670
G210_0560
Candida maltosa
G210_0560
I
0.675
G647_04815
Cladophialophora carrionii
G647_04815
I
0.675
GGTG_07952
Gaeumannomyces graminis
GGTG_07952
I
0.673
GLRG_03233
Colletotrichum graminicola
GLRG_03233
I
0.674
GMDG_00789
Pseudogymnoascus destructans
GMDG_00789
I
0.668
GNLVRS01_PISO0E08012g
Millerozyma farinosa
GNLVRS01_PISO0E08012g
I
0.704
GNLVRS01_PISO0F09355g
Millerozyma farinosa
GNLVRS01_PISO0F09355g
I
0.704
gw1.15.255.1
Mycosphaerella fijiensis
gw1.15.255.1
I
0.667
H072_327
Dactylellina haptotyla
H072_327
I
0.674
H101_06747
Trichophyton interdigitale
H101_06747
I
0.669
H102_04304
Trichophyton rubrum
H102_04304
I
0.669
H105_04329
Trichophyton soudanense
H105_04329
I
0.669
HCBG_05483
Histoplasma capsulatum
HCBG_05483
I
0.666
HelroG70386
Helobdella robusta
HelroG70386
I
0.651
HMPREF1120_04684
Exophiala dermatitidis
HMPREF1120_04684
I
0.675
HMPREF1541_04667
Cyphellophora europaea
HMPREF1541_04667
I
0.680
HMPREF1624_04412
Sporothrix schenckii
HMPREF1624_04412
I
0.673
HPODL_00388
Ogataea parapolymorpha
HPODL_00388
I
0.671
KAFR_0H03130
Kazachstania africana
KAFR_0H03130
I
0.705
KAFR_0I02180
Kazachstania africana
KAFR_0I02180
I
0.736
KLLA0_D04862g
Kluyveromyces lactis
KLLA0_D04862g
I
0.664
KLTH0H12144g
Lachancea thermotolerans
KLTH0H12144g
I
0.782
KLTH0H12144g
Kluyveromyces thermotolerans
KLTH0H12144g
I
0.782
KNAG_0I01300
Kazachstania naganishii
KNAG_0I01300
I
0.732
Kpol_457p14
Vanderwaltozyma polyspora
Kpol_457p14
I
0.714
LALA0_S03e09428g
Lachancea lanzarotensis
LALA0_S03e09428g
I
0.748
LELG_03203
Lodderomyces elongisporus
LELG_03203
I
0.677
LEMA_P019700.1
Leptosphaeria maculans
LEMA_P019700.1
I
0.672
M407DRAFT_70388
Tulasnella calospora
M407DRAFT_70388
I
0.652
M437DRAFT_81253
Aureobasidium melanogenum
M437DRAFT_81253
I
0.670
M438DRAFT_393589
Aureobasidium pullulans
M438DRAFT_393589
I
0.670
MAC_02434
Metarhizium acridum
MAC_02434
I
0.676
MAJ_05697
Metarhizium majus
MAJ_05697
I
0.675
MAM_06665
Metarhizium album
MAM_06665
I
0.676
MANI_023048
Metarhizium anisopliae
MANI_023048
I
0.675
MAPG_07750
Magnaporthe poae
MAPG_07750
I
0.673
MBM_03129
Marssonina brunnea
MBM_03129
I
0.668
MBR_03889
Metarhizium brunneum
MBR_03889
I
0.674
MCYG_06867
Microsporum canis
MCYG_06867
I
0.669
MCYG_06867
Arthroderma otae
MCYG_06867
I
0.669
MGG_04000
Magnaporthe oryzae
MGG_04000
I
0.670
MGU_07283
Metarhizium guizhouense
MGU_07283
I
0.675
MGYG_03742
Microsporum gypseum
MGYG_03742
I
0.669
MPH_13091
Macrophomina phaseolina
MPH_13091
I
0.679
MYCFIDRAFT_10959
Pseudocercospora fijiensis
MYCFIDRAFT_10959
I
0.667
Mycgr3G110369
Zymoseptoria tritici
Mycgr3G110369
I
0.669
MYCTH_2301302
Myceliophthora thermophila
MYCTH_2301302
I
0.667
NCAS_0C04880
Naumovozyma castellii
NCAS_0C04880
I
0.743
NCU06701
Neurospora crassa
NCU06701
I
0.671
NDAI_0G04240
Naumovozyma dairenensis
NDAI_0G04240
I
0.741
NechaG49316
Fusarium solani
NechaG49316
I
0.678
NEUTE1DRAFT_119738
Neurospora tetrasperma
NEUTE1DRAFT_119738
I
0.671
OCS_02678
Ophiocordyceps sinensis
OCS_02678
I
0.672
OIDMADRAFT_184073
Oidiodendron maius
OIDMADRAFT_184073
I
0.652
PAAG_00480
Paracoccidioides sp lutzii
PAAG_00480
I
0.670
PABG_06744
Paracoccidioides brasiliensis
PABG_06744
I
0.668
PAS_chr2-2_0153
Komagataella pastoris
PAS_chr2-2_0153
I
0.683
Pc20g01690
Penicillium chrysogenum
Pc20g01690
I
0.669
PCH_Pc20g01690
Penicillium rubens
PCH_Pc20g01690
I
0.669
PDE_02161
Penicillium oxalicum
PDE_02161
I
0.669
PDIP_47410
Penicillium digitatum
PDIP_47410
I
0.669
PEX1_087840
Penicillium expansum
PEX1_087840
I
0.669
PFICI_07890
Pestalotiopsis fici
PFICI_07890
I
0.671
PGUG_04792
Candida guilliermondii
PGUG_04792
I
0.659
PGUG_04792
Meyerozyma guilliermondii
PGUG_04792
I
0.659
PICST_78645
Scheffersomyces stipitis
PICST_78645
I
0.694
PITC_028740
Penicillium italicum
PITC_028740
I
0.669
PMAA_084960
Talaromyces marneffei
PMAA_084960
I
0.670
PMAA_084960
Penicillium marneffei
PMAA_084960
I
0.670
PNEG_02893
Pneumocystis murina
PNEG_02893
I
0.679
PredSwiss_ASS2010_3110.1
Pneumocystis carinii
PredSwiss_ASS2010_3110.1
I
0.679
PredSwiss_CON653.4
Pneumocystis carinii
PredSwiss_CON653.4
I
0.679
PTRG_01267
Pyrenophora triticirepentis
PTRG_01267
I
0.667
PTT_09109
Pyrenophora teres
PTT_09109
I
0.668
PV04_03763
Capronia semiimmersa
PV04_03763
I
0.676
PV05_05335
Exophiala xenobiotica
PV05_05335
I
0.675
PV06_00023
Exophiala oligosperma
PV06_00023
I
0.675
PV07_06647
Cladophialophora immunda
PV07_06647
I
0.676
PV08_04071
Exophiala spinifera
PV08_04071
I
0.675
PV09_00065
Verruconis gallopava
PV09_00065
I
0.666
PV10_05596
Exophiala mesophila
PV10_05596
I
0.675
PV11_01295
Exophiala sideris
PV11_01295
I
0.675
PVAR5_6603
Byssochlamys spectabilis
PVAR5_6603
I
0.670
S40285_05794
Stachybotrys chlorohalonata
S40285_05794
I
0.666
S40288_01173
Stachybotrys chartarum
S40288_01173
I
0.666
SAKL0D08734g
Lachancea kluyveri
SAKL0D08734g
I
0.739
SAPIO_CDS9685
Scedosporium apiospermum
SAPIO_CDS9685
I
0.673
SBOR_6602
Sclerotinia borealis
SBOR_6602
I
0.669
Scas_Contig488.2
Saccharomyces castellii
Scas_Contig488.2
I
0.743
SEPMUDRAFT_46603
Sphaerulina musiva
SEPMUDRAFT_46603
I
0.669
SETTUDRAFT_147537
Setosphaeria turcica
SETTUDRAFT_147537
I
0.671
SJAG_04839
Schizosaccharomyces japonicus
SJAG_04839
I
0.670
SMAC_06634
Sordaria macrospora
SMAC_06634
I
0.656
SNOG_15366
Stagonospora nodorum
SNOG_15366
I
0.671
SNOG_15366
Phaeosphaeria nodorum
SNOG_15366
I
0.671
SOCG_01623
Schizosaccharomyces octosporus
SOCG_01623
I
0.679
sak1
Schizosaccharomyces pombe
SPAC3G9.14
I
0.684
SPAPADRAFT_70246
Spathaspora passalidarum
SPAPADRAFT_70246
I
0.694
SPBR_05608
Sporothrix brasiliensis
SPBR_05608
I
0.673
SPOG_03909
Schizosaccharomyces cryophilus
SPOG_03909
I
0.678
SPPG_01648
Spizellomyces punctatus
SPPG_01648
I
0.650
SS1G_00575
Sclerotinia sclerotiorum
SS1G_00575
I
0.669
TBLA_0C01490
Tetrapisispora blattae
TBLA_0C01490
I
0.718
TDEL_0B05980
Torulaspora delbrueckii
TDEL_0B05980
I
0.741
TEQG_02965
Trichophyton equinum
TEQG_02965
I
0.669
TESG_00180
Trichophyton tonsurans
TESG_00180
I
0.669
THITE_2107553
Thielavia terrestris
THITE_2107553
I
0.669
TPHA_0B03750
Tetrapisispora phaffii
TPHA_0B03750
I
0.726
TRIATDRAFT_83492
Trichoderma atroviride
TRIATDRAFT_83492
I
0.676
TRIREDRAFT_69349
Trichoderma reesei
TRIREDRAFT_69349
I
0.673
TRIVIDRAFT_34449
Trichoderma virens
TRIVIDRAFT_34449
I
0.673
TRV_04907
Trichophyton verrucosum
TRV_04907
I
0.669
TSTA_119980
Talaromyces stipitatus
TSTA_119980
I
0.670
U727_0043066021
Penicillium solitum
U727_0043066021
I
0.669
UCRPA7_1505
Togninia minima
UCRPA7_1505
I
0.674
UREG_04378
Uncinocarpus reesii
UREG_04378
I
0.669
UV8b_7132
Ustilaginoidea virens
UV8b_7132
I
0.657
V499_05779
Pseudogymnoascus pannorum
V499_05779
I
0.668
VDAG_01397
Verticillium dahliae
VDAG_01397
I
0.674
VDBG_04171
Verticillium albo atrum
VDBG_04171
I
0.674
VDBG_04171
Verticillium alfalfae
VDBG_04171
I
0.674
VHEMI10038
Torrubiella hemipterigena
VHEMI10038
I
0.676
W97_05844
Coniosporium apollinis
W97_05844
I
0.673
X797_002751
Metarhizium robertsii
X797_002751
I
0.675
XP_002492053.1
Pichia pastoris
XP_002492053.1
I
0.683
YALI0_E13596g
Yarrowia lipolytica
YALI0_E13596g
I
0.695
RFX1
Saccharomyces cerevisiae
YLR176C
D
0.736
Z517_10332
Fonsecaea pedrosoi
Z517_10332
I
0.675
Z518_01660
Rhinocladiella mackenziei
Z518_01660
I
0.676
ZBAI_03427
Zygosaccharomyces bailii
ZBAI_03427
I
0.732
ZBAI_08430
Zygosaccharomyces bailii
ZBAI_08430
I
0.732
ZYRO0E04642g
Zygosaccharomyces rouxii
ZYRO0E04642g
I
0.731