AFUN011072 (Anopheles funestus)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 AFUN011072 T319127_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx7
M00823_2.00 		Mus musculus
GTYRCYRNSB
VSNYRGYRAC		 PBM
Weirauch et al.(2013)
pTH3516 		0.688 0.544
Rfx7
M00187_2.00 		Mus musculus
BGTHDYYRNN
NNYRRHDACV		 PBM
Badis et al.(2009)
Rfxdc2_3516 		0.688 0.544
RFX7
M05729_2.00 		Homo sapiens
BGTTRCYRY
RYRGYAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_HT-SELEX 		0.688 0.544
RFX7
M05730_2.00 		Homo sapiens
BGTTGCYRB
VYRGCAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_Methyl-HT-SELEX 		0.688 0.544
RFX5
M03458_2.00 		Homo sapiens
BGTTRCYATRGYAACV
BGTTRCYATRGYAACV		 SELEX
Jolma et al.(2013)
RFX5_1 		0.672 0.468
RFX5
M03459_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_2 		0.672 0.468
RFX5
M03460_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_3 		0.672 0.468
RFX5
M05725_2.00 		Homo sapiens
BGTTRCYANGBGTTGCYRN
NYRGCAACVCNTRGYAACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_1 		0.672 0.468
RFX5
M05726_2.00 		Homo sapiens
NYRVYAACSGTTRCYAN
NTRGYAACSGTTRBYRN		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_2 		0.672 0.468
RFX5
M08009_2.00 		Homo sapiens
KCRBYDGTTRCYRRG
CYYRGYAACHRVYGM		 ChIP-seq
Gerstein et al.(2012)
GM12878_RFX5_Stanford 		0.672 0.468
RFX5
M08010_2.00 		Homo sapiens
DBVBYDGTTGCYRGGBVRR
YYBVCCYRGCAACHRVBVH		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RFX5_Stanford 		0.672 0.468
RFX5
M08011_2.00 		Homo sapiens
TCVBYDGTTDCYRDG
CHYRGHAACHRVBGA		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_RFX5_Stanford 		0.672 0.468
RFX5
M08012_2.00 		Homo sapiens
YDGTTRCYRKGBVRV
BYBVCMYRGYAACHR		 ChIP-seq
Gerstein et al.(2012)
HepG2_RFX5_Stanford 		0.672 0.468
RFX5
M09364_2.00 		Homo sapiens
VNNVBYDGTTGCYRKGNVRV
BYBNCMYRGCAACHRVBNNB		 Misc
Kulakovskiy et al.(2013)
RFX5_HUMAN.H11MO.0.A 		0.672 0.468
RFX5
M09629_2.00 		Homo sapiens
NDGTTRCYADGV
BCHTRGYAACHN		 Misc
Heinz et al.(2010)
GM12878-Rfx5_GSE31477 		0.672 0.468
RFX5
M11249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_03 		0.672 0.468
RFX5
M11250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_05 		0.672 0.468
RFX5
M05727_2.00 		Homo sapiens
BGTYRYYRNGBGTTGYYRN
NYRRCAACVCNYRRYRACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_1 		0.672 0.468
RFX5
M05728_2.00 		Homo sapiens
NTRGYAASSGTYRBYRN
NYRVYRACSSTTRCYAN		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_2 		0.672 0.468
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN011072-PA RFX 255 333

Links

Other RFX family TFs
Other Anopheles funestus TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02953 Capronia coronata A1O1_02953 I 0.000
A1O3_05076 Capronia epimyces A1O3_05076 I 0.000
A1O5_01401 Cladophialophora psammophila A1O5_01401 I 0.000
A1O7_08648 Cladophialophora yegresii A1O7_08648 I 0.000
AB00218.1 Alternaria brassicicola AB00218.1 I 0.000
ACRE_007430 Acremonium chrysogenum ACRE_007430 I 0.000
AOL_s00006g292 Arthrobotrys oligospora AOL_s00006g292 I 0.000
AUEXF2481DRAFT_6770 Aureobasidium subglaciale AUEXF2481DRAFT_6770 I 0.000
BAUCODRAFT_86213 Baudoinia compniacensis BAUCODRAFT_86213 I 0.000
BBA_03811 Beauveria bassiana BBA_03811 I 0.000
BDDG_03885 Blastomyces dermatitidis BDDG_03885 I 0.000
BGHDH14_bgh00206 Blumeria graminis BGHDH14_bgh00206 I 0.000
BN7_6590 Wickerhamomyces ciferrii BN7_6590 I 0.000
ACLA_076150 Aspergillus clavatus CADACLAG00006696 I 0.000
CADAFLAG00010295 Aspergillus flavus CADAFLAG00010295 I 0.000
AFUA_2G17220 Aspergillus fumigatus CADAFUAG00004619 I 0.000
CADANGAG00004639 Aspergillus niger CADANGAG00004639 I 0.000
ANIA_09492 Aspergillus nidulans CADANIAG00000196 I 0.000
ATEG_10025 Aspergillus terreus CADATEAG00003259 I 0.000
NFIA_092600 Neosartorya fischeri CADNFIAG00008096 I 0.000
CANTEDRAFT_125270 Candida tenuis CANTEDRAFT_125270 I 0.000
CANTEDRAFT_133402 Candida tenuis CANTEDRAFT_133402 I 0.000
CaO19.10266 Candida albicans CaO19.10266 I 0.000
CaO19.12493 Candida albicans CaO19.12493 I 0.000
CaO19.2752 Candida albicans CaO19.2752 I 0.000
CaO19.5026 Candida albicans CaO19.5026 I 0.000
CCM_08024 Cordyceps militaris CCM_08024 I 0.000
CD36_12870 Candida dubliniensis CD36_12870 I 0.000
CD36_42380 Candida dubliniensis CD36_42380 I 0.000
CFIO01_07840 Colletotrichum fioriniae CFIO01_07840 I 0.000
CH063_04661 Colletotrichum higginsianum CH063_04661 I 0.000
CHGG_05487 Chaetomium globosum CHGG_05487 I 0.000
CIMG_09396 Coccidioides immitis CIMG_09396 I 0.000
CLUG_01374 Candida lusitaniae CLUG_01374 I 0.000
CLUG_01374 Clavispora lusitaniae CLUG_01374 I 0.000
CLUG_04828 Candida lusitaniae CLUG_04828 I 0.000
CLUG_04828 Clavispora lusitaniae CLUG_04828 I 0.000
Cob_05419 Colletotrichum orbiculare Cob_05419 I 0.000
COCC4DRAFT_56721 Bipolaris maydis COCC4DRAFT_56721 I 0.000
COCCADRAFT_6504 Bipolaris zeicola COCCADRAFT_6504 I 0.000
COCMIDRAFT_5202 Bipolaris oryzae COCMIDRAFT_5202 I 0.000
COCSADRAFT_176125 Bipolaris sorokiniana COCSADRAFT_176125 I 0.000
COCVIDRAFT_30818 Bipolaris victoriae COCVIDRAFT_30818 I 0.000
CORT_0D03650 Candida orthopsilosis CORT_0D03650 N 0.000
CORT_0E01530 Candida orthopsilosis CORT_0E01530 I 0.000
CPAG_03992 Candida parapsilosis CPAG_03992 I 0.000
CPAG_05546 Candida parapsilosis CPAG_05546 N 0.000
CPC735_017710 Coccidioides posadasii CPC735_017710 I 0.000
CPUR_00983 Claviceps purpurea CPUR_00983 I 0.000
CSUB01_11387 Colletotrichum sublineola CSUB01_11387 I 0.000
CTHT_0071740 Chaetomium thermophilum CTHT_0071740 I 0.000
CTRG_00141 Candida tropicalis CTRG_00141 I 0.000
CTRG_03662 Candida tropicalis CTRG_03662 I 0.000
DEHA2D06490g Debaryomyces hansenii DEHA2D06490g I 0.000
DEHA2E15928g Debaryomyces hansenii DEHA2E15928g I 0.000
DOTSEDRAFT_69682 Dothistroma septosporum DOTSEDRAFT_69682 I 0.000
DRE_00729 Drechslerella stenobrocha DRE_00729 I 0.000
EPUS_06075 Endocarpon pusillum EPUS_06075 I 0.000
estExt_fgenesh1_pg.C_10443 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_10443 I 0.000
estExt_fgenesh1_pg.C_11081 Cryphonectria parasitica estExt_fgenesh1_pg.C_11081 I 0.000
estExt_Genewise1.C_170195 Neurospora discreta estExt_Genewise1.C_170195 I 0.000
estExt_Genewise1Plus.C_140693 Mycosphaerella fijiensis estExt_Genewise1Plus.C_140693 I 0.000
estExt_gwp_genewisePlus_worm.C_chr_1.20217 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_1.20217 I 0.000
EURHEDRAFT_453290 Aspergillus ruber EURHEDRAFT_453290 I 0.000
EV44_g1622 Erysiphe necator EV44_g1622 I 0.000
e_gw1.00609.29.1 Aspergillus carbonarius e_gw1.00609.29.1 I 0.000
e_gw1.20.504.1 Nectria haematococca e_gw1.20.504.1 I 0.000
e_gww1.1.1.1414.1 Pichia stipitis e_gww1.1.1.1414.1 I 0.000
F503_02301 Ophiostoma piceae uamh F503_02301 I 0.000
FFUJ_07657 Fusarium fujikuroi FFUJ_07657 I 0.000
fgenesh1_pg.C_chr_2000670 Mycosphaerella graminicola fgenesh1_pg.C_chr_2000670 I 0.000
FGRRES_02743 Fusarium graminearum FGRRES_02743 I 0.000
FOXG_10299 Fusarium oxysporum FOXG_10299 I 0.000
FPSE_11115 Fusarium pseudograminearum FPSE_11115 I 0.000
FVEG_08948 Fusarium verticillioides FVEG_08948 I 0.000
G210_1021 Candida maltosa G210_1021 I 0.000
G210_5085 Candida maltosa G210_5085 I 0.000
G647_07623 Cladophialophora carrionii G647_07623 I 0.000
GGTG_08988 Gaeumannomyces graminis GGTG_08988 I 0.000
GLRG_10519 Colletotrichum graminicola GLRG_10519 I 0.000
GNLVRS01_PISO0A05500g Millerozyma farinosa GNLVRS01_PISO0A05500g I 0.000
GNLVRS01_PISO0B05567g Millerozyma farinosa GNLVRS01_PISO0B05567g I 0.000
GNLVRS01_PISO0M20318g Millerozyma farinosa GNLVRS01_PISO0M20318g I 0.000
GNLVRS01_PISO0N20561g Millerozyma farinosa GNLVRS01_PISO0N20561g I 0.000
GSTUM_00010178001 Tuber melanosporum GSTUM_00010178001 I 0.000
H072_10443 Dactylellina haptotyla H072_10443 I 0.000
H101_06499 Trichophyton interdigitale H101_06499 I 0.000
H102_04056 Trichophyton rubrum H102_04056 I 0.000
H105_04085 Trichophyton soudanense H105_04085 I 0.000
HCBG_01536 Histoplasma capsulatum HCBG_01536 I 0.000
HMPREF1120_00931 Exophiala dermatitidis HMPREF1120_00931 I 0.000
HMPREF1541_09730 Cyphellophora europaea HMPREF1541_09730 I 0.000
HMPREF1624_05376 Sporothrix schenckii HMPREF1624_05376 I 0.000
HPODL_04926 Ogataea parapolymorpha HPODL_04926 I 0.000
KUCA_T00004312001 Kuraishia capsulata KUCA_T00004312001 I 0.000
LELG_03482 Lodderomyces elongisporus LELG_03482 I 0.000
LELG_04370 Lodderomyces elongisporus LELG_04370 I 0.000
LEMA_P078460.1 Leptosphaeria maculans LEMA_P078460.1 I 0.000
M437DRAFT_44413 Aureobasidium melanogenum M437DRAFT_44413 I 0.000
M438DRAFT_334709 Aureobasidium pullulans M438DRAFT_334709 I 0.000
MAC_01626 Metarhizium acridum MAC_01626 I 0.000
MAJ_02407 Metarhizium majus MAJ_02407 I 0.000
MAM_00201 Metarhizium album MAM_00201 I 0.000
MANI_015197 Metarhizium anisopliae MANI_015197 I 0.000
MAPG_11476 Magnaporthe poae MAPG_11476 I 0.000
MBM_01810 Marssonina brunnea MBM_01810 I 0.000
MBR_02792 Metarhizium brunneum MBR_02792 I 0.000
MCYG_03934 Microsporum canis MCYG_03934 I 0.000
MCYG_03934 Arthroderma otae MCYG_03934 I 0.000
MGG_08757 Magnaporthe oryzae MGG_08757 I 0.000
MGU_00220 Metarhizium guizhouense MGU_00220 I 0.000
MGYG_07717 Microsporum gypseum MGYG_07717 I 0.000
MYCFIDRAFT_59416 Pseudocercospora fijiensis MYCFIDRAFT_59416 I 0.000
Mycgr3G90980 Zymoseptoria tritici Mycgr3G90980 I 0.000
MYCTH_2303382 Myceliophthora thermophila MYCTH_2303382 I 0.000
NCAS_0B02840 Naumovozyma castellii NCAS_0B02840 N 0.000
NCU09496 Neurospora crassa NCU09496 I 0.000
NechaG43113 Fusarium solani NechaG43113 I 0.000
NEUTE1DRAFT_80722 Neurospora tetrasperma NEUTE1DRAFT_80722 I 0.000
OIDMADRAFT_40290 Oidiodendron maius OIDMADRAFT_40290 I 0.000
PAAG_05527 Paracoccidioides sp lutzii PAAG_05527 I 0.000
PABG_05027 Paracoccidioides brasiliensis PABG_05027 I 0.000
PAS_chr3_0554 Komagataella pastoris PAS_chr3_0554 I 0.000
PAS_chr4_0487 Komagataella pastoris PAS_chr4_0487 I 0.000
Pc21g19860 Penicillium chrysogenum Pc21g19860 I 0.000
PCH_Pc21g19860 Penicillium rubens PCH_Pc21g19860 I 0.000
PDE_07881 Penicillium oxalicum PDE_07881 I 0.000
PDIP_38500 Penicillium digitatum PDIP_38500 I 0.000
PEX1_028120 Penicillium expansum PEX1_028120 I 0.000
PFICI_05781 Pestalotiopsis fici PFICI_05781 I 0.000
PGUG_02473 Candida guilliermondii PGUG_02473 I 0.000
PGUG_02473 Meyerozyma guilliermondii PGUG_02473 I 0.000
PGUG_03195 Candida guilliermondii PGUG_03195 I 0.000
PGUG_03195 Meyerozyma guilliermondii PGUG_03195 I 0.000
PICST_51364 Scheffersomyces stipitis PICST_51364 I 0.000
PICST_80960 Scheffersomyces stipitis PICST_80960 I 0.000
PITC_000810 Penicillium italicum PITC_000810 I 0.000
PMAA_034200 Talaromyces marneffei PMAA_034200 I 0.000
PMAA_034200 Penicillium marneffei PMAA_034200 I 0.000
PODANS_7_1460 Podospora anserina PODANS_7_1460 I 0.000
PTRG_09820 Pyrenophora triticirepentis PTRG_09820 I 0.000
PTT_12094 Pyrenophora teres PTT_12094 I 0.000
PV04_09226 Capronia semiimmersa PV04_09226 I 0.000
PV05_00394 Exophiala xenobiotica PV05_00394 I 0.000
PV07_00527 Cladophialophora immunda PV07_00527 I 0.000
PV08_09225 Exophiala spinifera PV08_09225 I 0.000
PV09_08170 Verruconis gallopava PV09_08170 I 0.000
PV10_05123 Exophiala mesophila PV10_05123 I 0.000
PV11_02934 Exophiala sideris PV11_02934 I 0.000
PVAR5_7748 Byssochlamys spectabilis PVAR5_7748 I 0.000
S40285_06430 Stachybotrys chlorohalonata S40285_06430 I 0.000
S40288_04249 Stachybotrys chartarum S40288_04249 I 0.000
SAPIO_CDS2067 Scedosporium apiospermum SAPIO_CDS2067 I 0.000
Scas_Contig721.92 Saccharomyces castellii Scas_Contig721.92 N 0.000
SEPMUDRAFT_147395 Sphaerulina musiva SEPMUDRAFT_147395 I 0.000
SETTUDRAFT_37086 Setosphaeria turcica SETTUDRAFT_37086 I 0.000
SMAC_07883 Sordaria macrospora SMAC_07883 I 0.000
SNOG_10626 Stagonospora nodorum SNOG_10626 I 0.000
SNOG_10626 Phaeosphaeria nodorum SNOG_10626 I 0.000
SOCG_02266 Schizosaccharomyces octosporus SOCG_02266 I 0.000
rst2 Schizosaccharomyces pombe SPAC6F12.02 D 0.000
SPAPADRAFT_153689 Spathaspora passalidarum SPAPADRAFT_153689 I 0.000
SPBR_04561 Sporothrix brasiliensis SPBR_04561 I 0.000
SPOG_00558 Schizosaccharomyces cryophilus SPOG_00558 I 0.000
SS1G_03567 Sclerotinia sclerotiorum SS1G_03567 I 0.000
TEQG_03348 Trichophyton equinum TEQG_03348 I 0.000
TESG_04883 Trichophyton tonsurans TESG_04883 I 0.000
THITE_2120332 Thielavia terrestris THITE_2120332 I 0.000
TRIATDRAFT_283087 Trichoderma atroviride TRIATDRAFT_283087 I 0.000
TRIREDRAFT_58897 Trichoderma reesei TRIREDRAFT_58897 I 0.000
TRIVIDRAFT_213523 Trichoderma virens TRIVIDRAFT_213523 I 0.000
TRV_02713 Trichophyton verrucosum TRV_02713 I 0.000
TSTA_063340 Talaromyces stipitatus TSTA_063340 I 0.000
U727_00433330511 Penicillium solitum U727_00433330511 I 0.000
UREG_04917 Uncinocarpus reesii UREG_04917 I 0.000
UV8b_6591 Ustilaginoidea virens UV8b_6591 I 0.000
VDAG_09618 Verticillium dahliae VDAG_09618 I 0.000
VHEMI08775 Torrubiella hemipterigena VHEMI08775 I 0.000
W97_08313 Coniosporium apollinis W97_08313 I 0.000
X797_000845 Metarhizium robertsii X797_000845 I 0.000
XP_002492783.1 Pichia pastoris XP_002492783.1 I 0.000
XP_002493922.1 Pichia pastoris XP_002493922.1 I 0.000
Z517_01468 Fonsecaea pedrosoi Z517_01468 I 0.000
Z518_02984 Rhinocladiella mackenziei Z518_02984 I 0.000
Z519_11866 Cladophialophora bantiana Z519_11866 I 0.000