MLOC_59560 (Hordeum vulgare)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 MLOC_59560 T320534_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.776 0.776
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_59560.1 RWP-RK 125 173
MLOC_59560.2 RWP-RK 117 165

Links

Other RWP-RK family TFs
Other Hordeum vulgare TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRE2 Arabidopsis thaliana AT5G15160 N
Bo2g012420 Brassica oleracea Bo2g012420 N
Bo3g010130 Brassica oleracea Bo3g010130 N
Bostr.2902s0250 Boechera stricta Bostr.2902s0250 N
Bra006286 Brassica rapa Bra006286 N
Bra008716 Brassica rapa Bra008716 N
Bra023508 Brassica rapa Bra023508 N
Cagra.1036s0041 Capsella grandiflora Cagra.1036s0041 N
Carubv10002337m.g Capsella rubella Carubv10002337m.g N
BNQ2 Arabidopsis lyrata scaffold_601543.1 N
Thhalv10015131m.g Eutrema salsugineum Thhalv10015131m.g N