MTR_0140s0010 (Medicago truncatula)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 MTR_0140s0010 T320539_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.850 0.850
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.850 0.850
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH16582 RWP-RK 148 167

Links

Other RWP-RK family TFs
Other Medicago truncatula TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL018695 Aedes aegypti AAEL018695 N
ACEP14882 Atta cephalotes ACEP14882 N
ADIR005407 Anopheles dirus ADIR005407 N
ANCCAN_04914 Ancylostoma caninum ANCCAN_04914 N
ANCCEY_13862 Ancylostoma ceylanicum ANCCEY_13862 N
ANCDUO_01695 Ancylostoma duodenale ANCDUO_01695 N
ASU_04577 Ascaris suum ASU_04577 N
BGLB005972 Biomphalaria glabrata BGLB005972 N
Bm6042 Brugia malayi Bm6042 N
BTMF_0000210501 Brugia timori BTMF_0000210501 N
CPIJ005379 Culex quinquefasciatus CPIJ005379 N
CpipJ_CPIJ005379 Culex pipiens CpipJ_CPIJ005379 N
ENSOARG00000006350 Ovis aries ENSOARG00000006350 N
e_gw.68.282.1 Branchiostoma floridae e_gw.68.282.1 N
GPUH_0001020201 Gongylonema pulchrum GPUH_0001020201 N
HCOI00708300 Haemonchus contortus HCOI00708300 N
HPBE_0002562201 Heligmosomoides bakeri HPBE_0002562201 N
HPLM_0001560201 Haemonchus placei HPLM_0001560201 N
LOAG_18231 Loa loa LOAG_18231 N
LotgiG180212 Lottia gigantea LotgiG180212 N
nAv.1.0.1.g07054 Acanthocheilonema viteae nAv.1.0.1.g07054 N
nDi.2.2.2.g07220 Dirofilaria immitis nDi.2.2.2.g07220 N
nLs.2.1.2.g05824 Litomosoides sigmodontis nLs.2.1.2.g05824 N
nOo.2.0.1.g01527 Onchocerca ochengi nOo.2.0.1.g01527 N
OFLC_0001456001 Onchocerca flexuosa OFLC_0001456001 N
Sakowv30036706m.g Saccoglossus kowalevskii Sakowv30036706m.g N
scaffold26-EXSNAP2012.56 Pristionchus exspectatus scaffold26-EXSNAP2012.56 N
SPU_007389 Strongylocentrotus purpuratus SPU_007389 N
SVUK_0000622201 Strongylus vulgaris SVUK_0000622201 N
TCLT_0000698201 Thelazia callipaeda TCLT_0000698201 N
TCNE_0001907801 Toxocara canis TCNE_0001907801 N
TELCIR_06695 Teladorsagia circumcincta TELCIR_06695 N
WBGene00249034 Onchocerca volvulus WBGene00249034 N
WUBG_00082 Wuchereria bancrofti WUBG_00082 N