Cucsa.197700 (Cucumis sativus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Cucsa.197700 T320957_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.735 0.735
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.197700.1 RWP-RK 66 114

Links

Other RWP-RK family TFs
Other Cucumis sativus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_199954 Agaricus bisporus AGABI2DRAFT_199954 N
BOTBODRAFT_112983 Botryobasidium botryosum BOTBODRAFT_112983 N
CERSUDRAFT_20106 Ceriporiopsis subvermispora CERSUDRAFT_20106 N
CY34DRAFT_801082 Suillus luteus CY34DRAFT_801082 N
estExt_Genewise1.C_21367 Heterobasidion annosum estExt_Genewise1.C_21367 N
FIBRA_08791 Fibroporia radiculosa FIBRA_08791 N
FOMPIDRAFT_100979 Fomitopsis pinicola FOMPIDRAFT_100979 N
GALMADRAFT_239209 Galerina marginata GALMADRAFT_239209 N
gwh2.1.333.1 Phanerochaete chrysosporium gwh2.1.333.1 N
GYMLUDRAFT_162284 Gymnopus luxurians GYMLUDRAFT_162284 N
HETIRDRAFT_309579 Heterobasidion irregulare HETIRDRAFT_309579 N
JAAARDRAFT_32954 Jaapia argillacea JAAARDRAFT_32954 N
M378DRAFT_158512 Amanita muscaria M378DRAFT_158512 N
M404DRAFT_122870 Pisolithus tinctorius M404DRAFT_122870 N
M404DRAFT_992782 Pisolithus tinctorius M404DRAFT_992782 N
M408DRAFT_272137 Serendipita vermifera M408DRAFT_272137 N
M413DRAFT_438140 Hebeloma cylindrosporum M413DRAFT_438140 N
M422DRAFT_190562 Sphaerobolus stellatus M422DRAFT_190562 N
Moror_14742 Moniliophthora roreri Moror_14742 N
MVLG_04149 Microbotryum violaceum MVLG_04149 N
PAXRUDRAFT_832723 Paxillus rubicundulus PAXRUDRAFT_832723 N
PHLGIDRAFT_284945 Phlebiopsis gigantea PHLGIDRAFT_284945 N
PILCRDRAFT_789166 Piloderma croceum PILCRDRAFT_789166 N
PISMIDRAFT_85664 Pisolithus microcarpus PISMIDRAFT_85664 N
PLEOSDRAFT_42459 Pleurotus ostreatus PLEOSDRAFT_42459 N
SCHCODRAFT_269936 Schizophyllum commune SCHCODRAFT_269936 N
V565_076910 Rhizoctonia solani V565_076910 N