chr2.CM0272.20.nd (Lotus japonicus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 chr2.CM0272.20.nd T321296_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0272.20.nd RWP-RK 199 247

Links

Other RWP-RK family TFs
Other Lotus japonicus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29830.m001444 Ricinus communis 29830.m001444 N 0.857
AMTR_s00021p00218190 Amborella trichopoda AMTR_s00021p00218190 N 0.714
AMTR_s00044p00165760 Amborella trichopoda AMTR_s00044p00165760 N 0.776
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.811
Aquca_015_00350 Aquilegia coerulea Aquca_015_00350 N 0.796
RKD5 Arabidopsis thaliana AT4G35590 N 0.776
Bo1g006340 Brassica oleracea Bo1g006340 N 0.816
Bostr.7867s1419 Boechera stricta Bostr.7867s1419 N 0.755
Bra011626 Brassica rapa Bra011626 N 0.816
Cagra.2350s0102 Capsella grandiflora Cagra.2350s0102 N 0.796
Carubv10005148m.g Capsella rubella Carubv10005148m.g N 0.796
cassava26650.m1 Manihot esculenta cassava26650.m1 N 0.837
Ciclev10027531m.g Citrus clementina Ciclev10027531m.g N 0.857
Cla014580 Citrullus lanatus Cla014580 N 0.755
Cucsa.044270 Cucumis sativus Cucsa.044270 N 0.755
fgenesh2_kg.7__520__AT4G35590.1 Arabidopsis lyrata fgenesh2_kg.7__520__AT4G35590.1 N 0.796
gene13055-v1.0-hybrid Fragaria vesca gene13055-v1.0-hybrid N 0.878
GLYMA01G36360 Glycine max GLYMA01G36360 N 0.878
GLYMA11G09080 Glycine max GLYMA11G09080 N 0.878
Gorai.003G002500 Gossypium raimondii Gorai.003G002500 N 0.857
GSMUA_Achr8G13370_001 Musa acuminata GSMUA_Achr8G13370_001 N 0.837
MDP0000125133 Malus domestica MDP0000125133 N 0.918
MDP0000192895 Malus domestica MDP0000192895 N 0.918
MDP0000215412 Malus domestica MDP0000215412 N 0.918
MDP0000291622 Malus domestica MDP0000291622 N 0.898
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.757
MTR_5g024070 Medicago truncatula MTR_5g024070 N 0.837
orange1.1g039420m.g Citrus sinensis orange1.1g039420m.g N 0.857
Pm026816 Prunus mume Pm026816 N 0.918
POPTR_0005s10400 Populus trichocarpa POPTR_0005s10400 N 0.776
PRUPE_ppa011563mg Prunus persica PRUPE_ppa011563mg N 0.918
SapurV1A.0085s0060 Salix purpurea SapurV1A.0085s0060 N 0.755
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N 0.714
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N 0.714
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N 0.714
Si020172m.g Setaria italica Si020172m.g I 0.703
TCM_000070 Theobroma cacao TCM_000070 N 0.857
Thhalv10027037m.g Eutrema salsugineum Thhalv10027037m.g N 0.816
VIT_04s0044g00060 Vitis vinifera VIT_04s0044g00060 N 0.816