CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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S1FA2
(
Arabidopsis thaliana
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04689 (S1FA)
IPR006779
AT2G37120
T321339_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
S1FA3
M07252_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT3G09735_col_a
0.773
0.773
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G37120.1
S1FA
11
76
VVEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLKREKLKQGVPVPGE
Links
Other
S1FA
family TFs
Other
Arabidopsis thaliana
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLUG_05047
Candida lusitaniae
CLUG_05047
N
CLUG_05047
Clavispora lusitaniae
CLUG_05047
N
GNLVRS01_PISO0I05596g
Millerozyma farinosa
GNLVRS01_PISO0I05596g
N
GNLVRS01_PISO0J07401g
Millerozyma farinosa
GNLVRS01_PISO0J07401g
N
PGUG_00226
Candida guilliermondii
PGUG_00226
N
PGUG_00226
Meyerozyma guilliermondii
PGUG_00226
N