scaffold_402348.1 (Arabidopsis lyrata)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 scaffold_402348.1 T321432_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_402348.1 S1FA 11 76

Links

Other S1FA family TFs
Other Arabidopsis lyrata TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAS_chr1-3_0274 Komagataella pastoris PAS_chr1-3_0274 N
XP_002489620.1 Pichia pastoris XP_002489620.1 N