CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo1g051270
(
Brassica oleracea
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
Bo1g051270
T321571_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g051270.1
SAND
34
122
GYVEVMCGCTSHRYGDAVARLRVFPNGDLEITCECTPGCDEDKLTPAAFEKHSGRETARKWKNNVWVIVGGEKVPLSKTVLLKYYNEAS
Links
Other
SAND
family TFs
Other
Brassica oleracea
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA008027
Anopheles culicifacies
ACUA008027
N
A_03823
Schistosoma haematobium
A_03823
N
csin106540
Clonorchis sinensis
csin106540
N
D915_01091
Fasciola hepatica
D915_01091
N
DILT_0001089701
Diphyllobothrium latum
DILT_0001089701
N
ECANG7_04410
Echinococcus canadensis
ECANG7_04410
N
swi/snf
Ciona intestinalis
ENSCING00000004110
N
ENSCSAVG00000004620
Ciona savignyi
ENSCSAVG00000004620
N
HDID_0000819001
Hymenolepis diminuta
HDID_0000819001
N
HmN_000065900
Hymenolepis microstoma
HmN_000065900
N
HNAJ_0000675501
Hymenolepis nana
HNAJ_0000675501
N
LotgiG182249
Lottia gigantea
LotgiG182249
N
Ocbimv22035363m.g
Octopus bimaculoides
Ocbimv22035363m.g
N
Sakowv30022101m.g
Saccoglossus kowalevskii
Sakowv30022101m.g
N
scaffold164-EXSNAP2012.18
Pristionchus exspectatus
scaffold164-EXSNAP2012.18
N
SCUD_0000101601
Schistosoma curassoni
SCUD_0000101601
N
Sjc_0053770
Schistosoma japonicum
Sjc_0053770
N
Smp_008830
Schistosoma mansoni
Smp_008830
N
SMU15038703
Schmidtea mediterranea
SMU15038703
N
SPER_0000373001
Spirometra erinaceieuropaei
SPER_0000373001
N
SPER_0002845401
Spirometra erinaceieuropaei
SPER_0002845401
N
T265_00769
Opisthorchis viverrini
T265_00769
N