GMEB2 (Bos taurus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSBTAG00000014769 T321623_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.994 1.000
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.994 1.000
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.994 1.000
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.994 1.000
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.994 1.000
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.994 1.000
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.994 1.000
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.992 0.947
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.992 0.933
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.986 0.747
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.986 0.747
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.986 0.733
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.986 0.733
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.986 0.733
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.986 0.733
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.986 0.733
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.981 0.707
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.981 0.693
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.956 0.627
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000019648 SAND 87 162

Links

Other SAND family TFs
Other Bos taurus TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006403 Ricinus communis 30169.m006403 I 0.000
BHLH128 Arabidopsis thaliana AT1G05805 I 0.000
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.000
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.000
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.000
Bo5g006980 Brassica oleracea Bo5g006980 I 0.000
Bo5g007030 Brassica oleracea Bo5g007030 I 0.000
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.000
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.000
Bra015456 Brassica rapa Bra015456 I 0.000
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.000
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.000
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.000
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.000
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.000
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.000
Ca_07284 Cicer arietinum Ca_07284 I 0.000
Ca_14007 Cicer arietinum Ca_14007 I 0.000
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.000
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.000
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.000
F775_24576 Aegilops tauschii F775_24576 I 0.000
F775_26506 Aegilops tauschii F775_26506 I 0.000
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.000
GRMZM2G114873 Zea mays GRMZM2G114873 I 0.000
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.000
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.000
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.000
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.000
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.000
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.000
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.000
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.000
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.000
MDP0000307685 Malus domestica MDP0000307685 I 0.000
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.000
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.000
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.000
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.000
OB01G49420 Oryza brachyantha OB01G49420 I 0.000
OB04G24170 Oryza brachyantha OB04G24170 I 0.000
OBART01G40680 Oryza barthii OBART01G40680 I 0.000
OBART04G16900 Oryza barthii OBART04G16900 I 0.000
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.000
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.000
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.000
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.000
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.000
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.000
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.000
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.000
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.000
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.000
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.000
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.000
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.000
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.000
OS01G0900800 Oryza sativa OS01G0900800 I 0.000
OS04G0489600 Oryza sativa OS04G0489600 I 0.000
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.000
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.000
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.000
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.000
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.000
Si001123m.g Setaria italica Si001123m.g I 0.000
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.000
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.000
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.000
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.000
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.000
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.000
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.000
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.000
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.000