fgenesh1_pg.scaffold_252000020 (Physcomitrella patens)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 fgenesh1_pg.scaffold_252000020 T323294_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_252000020
M02481_2.00		 Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.980 0.947
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.936 0.813
For this family, TFs with SR scores > 0.885 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02481_2.00 SBP 52 126

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.scaffold_252000020 SBP 433 507

Links

Other SBP family TFs
Other Physcomitrella patens TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01627 Capronia coronata A1O1_01627 N
A1O3_07754 Capronia epimyces A1O3_07754 I
A1O5_08185 Cladophialophora psammophila A1O5_08185 N
A1O7_01132 Cladophialophora yegresii A1O7_01132 I
A1O9_01837 Exophiala aquamarina A1O9_01837 I
BBA_07071 Beauveria bassiana BBA_07071 I
BBA_09836 Beauveria bassiana BBA_09836 I
Bcin10g01580 Botrytis cinerea Bcin10g01580 I
BDDG_02031 Blastomyces dermatitidis BDDG_02031 I
BN946_scf184775.g19 Trametes cinnabarina BN946_scf184775.g19 N
BOTBODRAFT_202080 Botryobasidium botryosum BOTBODRAFT_202080 N
CADAFLAG00003504 Aspergillus flavus CADAFLAG00003504 N
CADAFLAG00005217 Aspergillus flavus CADAFLAG00005217 N
CADAFLAG00012297 Aspergillus flavus CADAFLAG00012297 I
AFUA_5G01460 Aspergillus fumigatus CADAFUAG00002865 N
CADANGAG00010911 Aspergillus niger CADANGAG00010911 N
ANIA_06837 Aspergillus nidulans CADANIAG00007635 N
ANIA_06846 Aspergillus nidulans CADANIAG00007644 D
CADAORAG00004258 Aspergillus oryzae CADAORAG00004258 I
CADAORAG00004876 Aspergillus oryzae CADAORAG00004876 N
NFIA_040650 Neosartorya fischeri CADNFIAG00003354 I
CaO19.1168 Candida albicans CaO19.1168 I
CaO19.1227 Candida albicans CaO19.1227 I
CaO19.8761 Candida albicans CaO19.8761 I
CaO19.8813 Candida albicans CaO19.8813 I
CD36_10810 Candida dubliniensis CD36_10810 I
CERSUDRAFT_114532 Ceriporiopsis subvermispora CERSUDRAFT_114532 I
CFIO01_05051 Colletotrichum fioriniae CFIO01_05051 N
CGGC5_8784 Colletotrichum gloeosporioides CGGC5_8784 I
CIMG_04661 Coccidioides immitis CIMG_04661 I
COCC4DRAFT_19355 Bipolaris maydis COCC4DRAFT_19355 I
COCCADRAFT_32122 Bipolaris zeicola COCCADRAFT_32122 I
COCMIDRAFT_24418 Bipolaris oryzae COCMIDRAFT_24418 I
COCSADRAFT_306311 Bipolaris sorokiniana COCSADRAFT_306311 I
COCVIDRAFT_12188 Bipolaris victoriae COCVIDRAFT_12188 I
CTRG_03493 Candida tropicalis CTRG_03493 I
CTRG_03975 Candida tropicalis CTRG_03975 N
DEHA2C03058g Debaryomyces hansenii DEHA2C03058g I
estExt_fgenesh1_pg.C_40169 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40169 I
estExt_fgenesh1_pg.C_chr_1.20230 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20230 N
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173 Nectria haematococca estExt_fgenesh1_pg.C_sca_29_chr12_4_00173 N
EURHEDRAFT_226967 Aspergillus ruber EURHEDRAFT_226967 I
EURHEDRAFT_447990 Aspergillus ruber EURHEDRAFT_447990 I
EURHEDRAFT_528519 Aspergillus ruber EURHEDRAFT_528519 I
e_gw1.00710.51.1 Aspergillus carbonarius e_gw1.00710.51.1 I
fgenesh1_pg.C_chr_6.1000096 Pichia stipitis fgenesh1_pg.C_chr_6.1000096 I
fgeneshTM_pg.13_#_14 Tremella mesenterica fgeneshTM_pg.13_#_14 N
FIBRA_03539 Fibroporia radiculosa FIBRA_03539 I
FOMPIDRAFT_1024907 Fomitopsis pinicola FOMPIDRAFT_1024907 I
FVEG_10380 Fusarium verticillioides FVEG_10380 I
G210_5732 Candida maltosa G210_5732 I
G647_01190 Cladophialophora carrionii G647_01190 I
GALMADRAFT_249209 Galerina marginata GALMADRAFT_249209 I
GGTG_05803 Gaeumannomyces graminis GGTG_05803 I
H101_03862 Trichophyton interdigitale H101_03862 I
HMPREF1120_00016 Exophiala dermatitidis HMPREF1120_00016 N
HMPREF1120_08148 Exophiala dermatitidis HMPREF1120_08148 I
HMPREF1541_00116 Cyphellophora europaea HMPREF1541_00116 I
HPODL_02161 Ogataea parapolymorpha HPODL_02161 I
JAAARDRAFT_136956 Jaapia argillacea JAAARDRAFT_136956 I
KUCA_T00005789001 Kuraishia capsulata KUCA_T00005789001 I
Kwal_6732 Kluyveromyces waltii Kwal_6732 I
LEMA_P120870.1 Leptosphaeria maculans LEMA_P120870.1 I
M378DRAFT_197822 Amanita muscaria M378DRAFT_197822 I
M404DRAFT_130508 Pisolithus tinctorius M404DRAFT_130508 I
M413DRAFT_441943 Hebeloma cylindrosporum M413DRAFT_441943 I
MAPG_04101 Magnaporthe poae MAPG_04101 I
MBM_00253 Marssonina brunnea MBM_00253 I
MCYG_05833 Microsporum canis MCYG_05833 I
MCYG_05833 Arthroderma otae MCYG_05833 I
MGG_05153 Magnaporthe oryzae MGG_05153 I
MGG_07131 Magnaporthe oryzae MGG_07131 I
MGYG_06143 Microsporum gypseum MGYG_06143 I
Moror_6819 Moniliophthora roreri Moror_6819 I
MPH_01921 Macrophomina phaseolina MPH_01921 I
NechaG102141 Fusarium solani NechaG102141 N
OCS_01600 Ophiocordyceps sinensis OCS_01600 I
OIDMADRAFT_57009 Oidiodendron maius OIDMADRAFT_57009 I
PAXRUDRAFT_132889 Paxillus rubicundulus PAXRUDRAFT_132889 I
Pc12g14900 Penicillium chrysogenum Pc12g14900 I
PCH_Pc12g14900 Penicillium rubens PCH_Pc12g14900 I
PDE_09179 Penicillium oxalicum PDE_09179 I
PEX1_066340 Penicillium expansum PEX1_066340 I
PICST_32615 Scheffersomyces stipitis PICST_32615 I
PICST_66647 Scheffersomyces stipitis PICST_66647 N
PIIN_01818 Piriformospora indica PIIN_01818 N
PIIN_04332 Piriformospora indica PIIN_04332 N
PILCRDRAFT_51 Piloderma croceum PILCRDRAFT_51 I
PISMIDRAFT_675317 Pisolithus microcarpus PISMIDRAFT_675317 I
PITC_033600 Penicillium italicum PITC_033600 I
PLEOSDRAFT_158391 Pleurotus ostreatus PLEOSDRAFT_158391 I
PTRG_07169 Pyrenophora triticirepentis PTRG_07169 I
PTT_16310 Pyrenophora teres PTT_16310 I
PV04_00855 Capronia semiimmersa PV04_00855 I
PV04_10066 Capronia semiimmersa PV04_10066 I
PV06_07392 Exophiala oligosperma PV06_07392 I
PV07_01614 Cladophialophora immunda PV07_01614 I
PV07_04955 Cladophialophora immunda PV07_04955 N
PV10_02783 Exophiala mesophila PV10_02783 I
PV10_06359 Exophiala mesophila PV10_06359 I
PV10_09026 Exophiala mesophila PV10_09026 N
PVAR5_5942 Byssochlamys spectabilis PVAR5_5942 I
S40288_10288 Stachybotrys chartarum S40288_10288 I
SAKL0D14916g Lachancea kluyveri SAKL0D14916g I
SAPIO_CDS8046 Scedosporium apiospermum SAPIO_CDS8046 I
SBOR_6332 Sclerotinia borealis SBOR_6332 I
SCHCODRAFT_110416 Schizophyllum commune SCHCODRAFT_110416 N
SEPMUDRAFT_152096 Sphaerulina musiva SEPMUDRAFT_152096 N
SERLA73DRAFT_159962 Serpula lacrymans SERLA73DRAFT_159962 I
SNOG_00909 Stagonospora nodorum SNOG_00909 I
SNOG_09854 Stagonospora nodorum SNOG_09854 I
SNOG_09854 Phaeosphaeria nodorum SNOG_09854 I
SPAPADRAFT_61489 Spathaspora passalidarum SPAPADRAFT_61489 I
TEQG_06790 Trichophyton equinum TEQG_06790 I
TESG_06981 Trichophyton tonsurans TESG_06981 I
TRIATDRAFT_31829 Trichoderma atroviride TRIATDRAFT_31829 I
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I
TSTA_020390 Talaromyces stipitatus TSTA_020390 I
U727_00434270371 Penicillium solitum U727_00434270371 I
V565_050950 Rhizoctonia solani V565_050950 N
V565_106980 Rhizoctonia solani V565_106980 N
VHEMI03513 Torrubiella hemipterigena VHEMI03513 I
W97_02535 Coniosporium apollinis W97_02535 I
YALI0_D06193g Yarrowia lipolytica YALI0_D06193g N
Z517_01830 Fonsecaea pedrosoi Z517_01830 I
Z519_09408 Cladophialophora bantiana Z519_09408 N