Pavir.Ea03909 (Panicum virgatum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pavir.Ea03909 T323626_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.946 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03909.1.p SBP 86 160

Links

Other SBP family TFs
Other Panicum virgatum TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_005560 Acremonium chrysogenum ACRE_005560 I 0.000
AOL_s00097g503 Arthrobotrys oligospora AOL_s00097g503 I 0.000
BAUCODRAFT_78329 Baudoinia compniacensis BAUCODRAFT_78329 I 0.000
BBA_09506 Beauveria bassiana BBA_09506 I 0.000
Bcin03g00870 Botrytis cinerea Bcin03g00870 I 0.000
CCM_08972 Cordyceps militaris CCM_08972 I 0.000
CFIO01_10160 Colletotrichum fioriniae CFIO01_10160 I 0.000
CH063_11852 Colletotrichum higginsianum CH063_11852 I 0.000
CHGG_10452 Chaetomium globosum CHGG_10452 I 0.000
Cob_04720 Colletotrichum orbiculare Cob_04720 I 0.000
CSUB01_09634 Colletotrichum sublineola CSUB01_09634 I 0.000
CTHT_0015780 Chaetomium thermophilum CTHT_0015780 I 0.000
DRE_03471 Drechslerella stenobrocha DRE_03471 I 0.000
FFUJ_01774 Fusarium fujikuroi FFUJ_01774 I 0.000
FGRRES_01564 Fusarium graminearum FGRRES_01564 I 0.000
FOXG_11142 Fusarium oxysporum FOXG_11142 I 0.000
FPSE_00770 Fusarium pseudograminearum FPSE_00770 I 0.000
GGTG_11131 Gaeumannomyces graminis GGTG_11131 I 0.000
GLRG_09934 Colletotrichum graminicola GLRG_09934 I 0.000
GMDG_03461 Pseudogymnoascus destructans GMDG_03461 I 0.000
H072_5069 Dactylellina haptotyla H072_5069 I 0.000
MAC_05766 Metarhizium acridum MAC_05766 I 0.000
MAJ_06040 Metarhizium majus MAJ_06040 I 0.000
MANI_026774 Metarhizium anisopliae MANI_026774 I 0.000
MAPG_00807 Magnaporthe poae MAPG_00807 I 0.000
MBR_06802 Metarhizium brunneum MBR_06802 I 0.000
MGG_02377 Magnaporthe oryzae MGG_02377 I 0.000
MGU_04563 Metarhizium guizhouense MGU_04563 I 0.000
MYCFIDRAFT_114915 Pseudocercospora fijiensis MYCFIDRAFT_114915 I 0.000
MYCTH_2312847 Myceliophthora thermophila MYCTH_2312847 I 0.000
NechaG89712 Fusarium solani NechaG89712 I 0.000
NEUTE1DRAFT_65511 Neurospora tetrasperma NEUTE1DRAFT_65511 I 0.000
OIDMADRAFT_170049 Oidiodendron maius OIDMADRAFT_170049 I 0.000
VDBG_05795 Verticillium albo atrum VDBG_05795 I 0.000