GSMUA_Achr1G10700_001 (Musa acuminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GSMUA_Achr1G10700_001 T323859_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P10700_001 Sigma 70 184 254

Links

Other Sigma 70 family TFs
Other Musa acuminata TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30148.m001468 Ricinus communis 30148.m001468 N 0.901
AMTR_s00011p00266100 Amborella trichopoda AMTR_s00011p00266100 N 0.873
Aquca_052_00048 Aquilegia coerulea Aquca_052_00048 N 0.873
SIGA Arabidopsis thaliana AT1G64860 N 0.915
BGIOSGA028041 Oryza indica BGIOSGA028041 N 0.831
Bo2g097550 Brassica oleracea Bo2g097550 N 0.901
Bostr.10180s0008 Boechera stricta Bostr.10180s0008 N 0.901
Bra008513 Brassica rapa Bra008513 N 0.901
BRADI3G16040 Brachypodium distachyon BRADI3G16040 N 0.817
Cagra.2194s0001 Capsella grandiflora Cagra.2194s0001 N 0.915
Carubv10020145m.g Capsella rubella Carubv10020145m.g N 0.915
cassava13701.valid.m1 Manihot esculenta cassava13701.valid.m1 N 0.873
cassava13702.valid.m1 Manihot esculenta cassava13702.valid.m1 N 0.873
cassava41980.valid.m1 Manihot esculenta cassava41980.valid.m1 N 0.873
Ca_22622 Cicer arietinum Ca_22622 N 0.859
Ca_22625 Cicer arietinum Ca_22625 N 0.873
chr3.CM0127.660.nc Lotus japonicus chr3.CM0127.660.nc N 0.887
Ciclev10031289m.g Citrus clementina Ciclev10031289m.g N 0.873
Cla006897 Citrullus lanatus Cla006897 N 0.887
Cucsa.073340 Cucumis sativus Cucsa.073340 N 0.887
Eucgr.A02994 Eucalyptus grandis Eucgr.A02994 N 0.887
evm.TU.supercontig_3807.1 Carica papaya evm.TU.supercontig_3807.1 N 0.901
F775_32229 Aegilops tauschii F775_32229 N 0.817
gene12547-v1.0-hybrid Fragaria vesca gene12547-v1.0-hybrid N 0.873
GLYMA09G35750 Glycine max GLYMA09G35750 N 0.915
GLYMA12G01600 Glycine max GLYMA12G01600 N 0.915
Gorai.004G255000 Gossypium raimondii Gorai.004G255000 N 0.887
Gorai.007G247500 Gossypium raimondii Gorai.007G247500 N 0.887
GRMZM2G006736 Zea mays GRMZM2G006736 N 0.845
GRMZM2G543629 Zea mays GRMZM2G543629 N 0.803
GSMUA_Achr11G08010_001 Musa acuminata GSMUA_Achr11G08010_001 N 0.873
LPERR08G03850 Leersia perrieri LPERR08G03850 N 0.845
Lus10020365.g Linum usitatissimum Lus10020365.g N 0.771
MDP0000934360 Malus domestica MDP0000934360 N 0.901
MDP0000939377 Malus domestica MDP0000939377 N 0.901
mgf004750m Mimulus guttatus mgf004750m N 0.845
mgf015154m Mimulus guttatus mgf015154m N 0.718
mgf016433m Mimulus guttatus mgf016433m N 0.845
MTR_0172s0030 Medicago truncatula MTR_0172s0030 N 0.859
OB08G14150 Oryza brachyantha OB08G14150 N 0.831
OBART08G03910 Oryza barthii OBART08G03910 N 0.831
OGLUM08G04010 Oryza glumaepatula OGLUM08G04010 N 0.831
OLONG_000145 Oryza longistaminata OLONG_000145 N 0.831
OMERI08G04040 Oryza meridionalis OMERI08G04040 N 0.831
ONIVA08G03880 Oryza nivara ONIVA08G03880 N 0.831
OPUNC08G03810 Oryza punctata OPUNC08G03810 N 0.831
orange1.1g010521m.g Citrus sinensis orange1.1g010521m.g N 0.859
ORGLA08G0033200 Oryza glaberrima ORGLA08G0033200 N 0.831
ORUFI08G04310 Oryza rufipogon ORUFI08G04310 N 0.831
OS08G0163400 Oryza sativa OS08G0163400 N 0.831
Pavir.Fb00544 Panicum virgatum Pavir.Fb00544 N 0.831
Pavir.J39657 Panicum virgatum Pavir.J39657 N 0.831
PDK_20s1319221g002 Phoenix dactylifera PDK_20s1319221g002 N 0.915
PGSC0003DMG400026491 Solanum tuberosum PGSC0003DMG400026491 N 0.831
PGSC0003DMG400027038 Solanum tuberosum PGSC0003DMG400027038 N 0.845
PK03826.1 Cannabis sativa PK03826.1 N 0.901
Pm019567 Prunus mume Pm019567 N 0.901
POPTR_0013s07290 Populus trichocarpa POPTR_0013s07290 N 0.887
POPTR_0019s06020 Populus trichocarpa POPTR_0019s06020 N 0.901
PRUPE_ppa004393mg Prunus persica PRUPE_ppa004393mg N 0.901
SapurV1A.0592s0030 Salix purpurea SapurV1A.0592s0030 N 0.901
SapurV1A.1326s0010 Salix purpurea SapurV1A.1326s0010 N 0.887
SapurV1A.1456s0040 Salix purpurea SapurV1A.1456s0040 N 0.887
Sb07g004340 Sorghum bicolor Sb07g004340 N 0.817
SIGA Arabidopsis lyrata scaffold_200883.1 N 0.915
Si013608m.g Setaria italica Si013608m.g N 0.831
Solyc03g097320.2 Solanum lycopersicum Solyc03g097320.2 N 0.831
Solyc06g072710.2 Solanum lycopersicum Solyc06g072710.2 N 0.845
TCM_025640 Theobroma cacao TCM_025640 N 0.887
Thhalv10002486m.g Eutrema salsugineum Thhalv10002486m.g N 0.901
Traes_7AL_33A778289 Triticum aestivum Traes_7AL_33A778289 N 0.817
Traes_7BL_0D553E505 Triticum aestivum Traes_7BL_0D553E505 N 0.818
Traes_7DL_21A260D0C Triticum aestivum Traes_7DL_21A260D0C N 0.817
TRIUR3_34525 Triticum urartu TRIUR3_34525 N 0.817
SIGA Vitis vinifera VIT_16s0039g00660 N 0.887