CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Traes_5DL_8DC4CC983
(
Triticum aestivum
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
Traes_5DL_8DC4CC983
T324026_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5DL_8DC4CC983.1
Sigma 70
245
315
MARSNFRLVIHVARKYQGYGLDIEDLVQDGCCGLMKTFEKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSRL
Links
Other
Sigma 70
family TFs
Other
Triticum aestivum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CCM_08648
Cordyceps militaris
CCM_08648
N
CHGG_06711
Chaetomium globosum
CHGG_06711
N
fgenesh1_pm.00153_#_150
Aspergillus carbonarius
fgenesh1_pm.00153_#_150
N
FGRRES_02787_M
Fusarium graminearum
FGRRES_02787_M
N
NEUTE1DRAFT_106151
Neurospora tetrasperma
NEUTE1DRAFT_106151
N
Pc16g12650
Penicillium chrysogenum
Pc16g12650
N
PCH_Pc16g12650
Penicillium rubens
PCH_Pc16g12650
N
TRIVIDRAFT_28800
Trichoderma virens
TRIVIDRAFT_28800
N
UCRNP2_4074
Neofusicoccum parvum
UCRNP2_4074
N
VDAG_01649
Verticillium dahliae
VDAG_01649
N