SIGA (Vitis vinifera)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 VIT_16s0039g00660 T324042_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_16s0039g00660.t01 Sigma 70 339 409

Links

Other Sigma 70 family TFs
Other Vitis vinifera TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava17541.valid.m1 Manihot esculenta cassava17541.valid.m1 N
cassava31792.valid.m1 Manihot esculenta cassava31792.valid.m1 N
evm.TU.contig_30141.2 Carica papaya evm.TU.contig_30141.2 N
mgf025389m Mimulus guttatus mgf025389m N
Pm024772 Prunus mume Pm024772 N
POPTR_0003s07200 Populus trichocarpa POPTR_0003s07200 N
PRUPE_ppa010295mg Prunus persica PRUPE_ppa010295mg N