Aquca_052_00048 (Aquilegia coerulea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Aquca_052_00048 T324147_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_052_00048.10 Sigma 70 267 337
Aquca_052_00048.1 Sigma 70 267 337
Aquca_052_00048.2 Sigma 70 267 337
Aquca_052_00048.3 Sigma 70 267 337
Aquca_052_00048.5 Sigma 70 267 337
Aquca_052_00048.6 Sigma 70 267 337
Aquca_052_00048.7 Sigma 70 267 337
Aquca_052_00048.8 Sigma 70 267 337
Aquca_052_00048.9 Sigma 70 267 337

Links

Other Sigma 70 family TFs
Other Aquilegia coerulea TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA015201 Oryza indica BGIOSGA015201 N
F775_23931 Aegilops tauschii F775_23931 N
GRMZM2G126194 Zea mays GRMZM2G126194 N
LPERR04G06900 Leersia perrieri LPERR04G06900 N
MLOC_48372 Hordeum vulgare MLOC_48372 N
OBART04G10380 Oryza barthii OBART04G10380 N
OGLUM04G10060 Oryza glumaepatula OGLUM04G10060 N
OMERI04G09500 Oryza meridionalis OMERI04G09500 N
ONIVA04G08240 Oryza nivara ONIVA04G08240 N
ORGLA02G0343600 Oryza glaberrima ORGLA02G0343600 N
ORGLA04G0074500 Oryza glaberrima ORGLA04G0074500 N
ORUFI04G11550 Oryza rufipogon ORUFI04G11550 N
OS04G0386900 Oryza sativa OS04G0386900 N
Pavir.Gb01948 Panicum virgatum Pavir.Gb01948 N
Si012575m.g Setaria italica Si012575m.g N
Traes_2DL_BB8506245 Triticum aestivum Traes_2DL_BB8506245 N
TRIUR3_24820 Triticum urartu TRIUR3_24820 N