CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.004G255000
(
Gossypium raimondii
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Gorai.004G255000
T324194_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G255000.1
Sigma 70
260
330
LAMSNVRLVMSIAQRYDNMGAEMPDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVDNSRT
Gorai.004G255000.2
Sigma 70
260
330
LAMSNVRLVMSIAQRYDNMGAEMPDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVDNSRT
Links
Other
Sigma 70
family TFs
Other
Gossypium raimondii
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_07414
Cicer arietinum
Ca_07414
N
Cla002614
Citrullus lanatus
Cla002614
N
orange1.1g001000m.g
Citrus sinensis
orange1.1g001000m.g
N
PGSC0003DMG400015167
Solanum tuberosum
PGSC0003DMG400015167
N
TCM_014549
Theobroma cacao
TCM_014549
N