CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000014614
(
Pelodiscus sinensis
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
ENSPSIG00000014614
T324907_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smad4
M05889_2.00
Mus musculus
KCYAGACR
YGTCTRGM
SMiLE-seq
Isakova et al.(2017)
Smad4
1.000
1.000
SMAD4
M09377_2.00
Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH
Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B
1.000
1.000
Smad4
M09382_2.00
Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH
Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A
1.000
1.000
SMAD4
M09634_2.00
Homo sapiens
NNNYGTCTGS
SCAGACRNNN
Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422
1.000
1.000
SMAD4
M11275_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q4
1.000
1.000
SMAD4
M11276_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6_01
1.000
1.000
SMAD4
M11277_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD4_Q6
1.000
1.000
Med
M06447_2.00
Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM
B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655
0.961
0.961
Med
M09693_2.00
Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR
Misc
Kulakovskiy et al.(2009)
Med
0.961
0.961
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000016512
SMAD
36
137
AKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVV
Links
Other
SMAD
family TFs
Other
Pelodiscus sinensis
TFs
217 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL013896
Aedes aegypti
AAEL013896
I
0.971
AAH84196
Xenopus laevis
AAH84196
I
1.000
AALB009485
Anopheles albimanus
AALB009485
I
0.931
Aan_R014474
Calypte anna
Aan_R014474
I
0.845
AARA004719
Anopheles arabiensis
AARA004719
I
0.951
AATE010695
Anopheles atroparvus
AATE010695
I
0.951
ACEP19585
Atta cephalotes
ACEP19585
I
0.843
ACHR000067
Anopheles christyi
ACHR000067
I
0.951
ACOM037505
Anopheles coluzzii
ACOM037505
I
0.951
ACUA025512
Anopheles culicifacies
ACUA025512
I
0.951
ACYPI000365
Acyrthosiphon pisum
ACYPI000365
I
0.951
ACYPI003759
Acyrthosiphon pisum
ACYPI003759
I
0.902
ACYPI005550
Acyrthosiphon pisum
ACYPI005550
I
0.873
ACYPI008450
Acyrthosiphon pisum
ACYPI008450
I
0.892
ADAC007516
Anopheles darlingi
ADAC007516
I
0.931
ADIR002761
Anopheles dirus
ADIR002761
I
0.951
AEPI002385
Anopheles epiroticus
AEPI002385
I
0.951
AFAF011208
Anopheles farauti
AFAF011208
I
0.951
Afo_R008709
Aptenodytes forsteri
Afo_R008709
I
1.000
AFUN009864
Anopheles funestus
AFUN009864
I
0.951
AGAP002902
Anopheles gambiae
AGAP002902
I
0.951
Alligator_sinensis_CCG001823.1
Alligator sinensis
Alligator_sinensis_CCG001823.1
I
0.882
Alligator_sinensis_CCG008910.1
Alligator sinensis
Alligator_sinensis_CCG008910.1
I
1.000
AMAM019778
Anopheles maculatus
AMAM019778
I
0.951
AMEM015931
Anopheles merus
AMEM015931
I
0.951
AMIN000723
Anopheles minimus
AMIN000723
I
0.951
ANCCAN_20978
Ancylostoma caninum
ANCCAN_20978
I
0.706
Aqu1.215833
Amphimedon queenslandica
Aqu1.215833
I
0.863
Aqu1.215834
Amphimedon queenslandica
Aqu1.215834
I
0.863
Aqu1.229767
Amphimedon queenslandica
Aqu1.229767
I
0.745
AQUA009305
Anopheles quadriannulatus
AQUA009305
I
0.951
ASIM_0001604001
Anisakis simplex
ASIM_0001604001
I
0.804
ASTEI00079
Anopheles stephensi
ASTEI00079
I
0.951
ASU_13433
Ascaris suum
ASU_13433
I
0.775
BGIBMGA010110
Bombyx mori
BGIBMGA010110
I
0.951
BGLB014287
Biomphalaria glabrata
BGLB014287
I
0.951
Bm3575
Brugia malayi
Bm3575
I
0.784
Brh_R010414
Buceros rhinoceros
Brh_R010414
I
1.000
BTMF_0000404601
Brugia timori
BTMF_0000404601
I
0.784
CapteG179368
Capitella teleta
CapteG179368
I
0.931
Cflo_07183--XP_392838.3_APIME
Camponotus floridanus
Cflo_07183--XP_392838.3_APIME
I
0.961
CGI_10000594
Crassostrea gigas
CGI_10000594
I
0.821
CGI_10018464
Crassostrea gigas
CGI_10018464
I
0.911
CLEC002594
Cimex lectularius
CLEC002594
I
0.951
Cmyd_10005540
Chelonia mydas
Cmyd_10005540
I
1.000
CPIJ002563
Culex quinquefasciatus
CPIJ002563
I
0.961
CpipJ_CPIJ002563
Culex pipiens
CpipJ_CPIJ002563
I
0.961
D915_03789
Fasciola hepatica
D915_03789
I
0.804
D917_09719
Trichinella nativa
D917_09719
I
0.824
D918_00298
Trichuris suis
D918_00298
I
0.760
DAPPUDRAFT_304115
Daphnia pulex
DAPPUDRAFT_304115
I
0.951
ECPE_0001832001
Echinostoma caproni
ECPE_0001832001
I
0.794
EEL_0000707501
Elaeophora elaphi
EEL_0000707501
I
0.775
EFV62078
Trichinella spiralis
EFV62078
I
0.824
SMAD4
Anolis carolinensis
ENSACAG00000010186
I
1.000
ENSAMEG00000002899
Ailuropoda melanoleuca
ENSAMEG00000002899
I
1.000
ENSAMXG00000017275
Astyanax mexicanus
ENSAMXG00000017275
I
0.961
ENSAMXG00000018339
Astyanax mexicanus
ENSAMXG00000018339
I
0.961
ENSAMXG00000019219
Astyanax mexicanus
ENSAMXG00000019219
I
0.990
ENSAPLG00000003924
Anas platyrhynchos
ENSAPLG00000003924
I
1.000
SMAD4
Bos taurus
ENSBTAG00000006919
I
1.000
SMAD4
Canis familiaris
ENSCAFG00000000164
I
1.000
SMAD4
Choloepus hoffmanni
ENSCHOG00000000860
I
1.000
smad4
Ciona intestinalis
ENSCING00000005559
I
0.922
SMAD4
Callithrix jacchus
ENSCJAG00000001910
I
1.000
SMAD4
Cavia porcellus
ENSCPOG00000006470
I
1.000
ENSCSAG00000018094
Chlorocebus sabaeus
ENSCSAG00000018094
I
1.000
ENSCSAVG00000006480
Ciona savignyi
ENSCSAVG00000006480
I
0.922
SMAD4
Danio rerio
ENSDARG00000012649
I
0.971
si:dkey-222b8.1
Danio rerio
ENSDARG00000045094
I
0.961
si:dkey-239n17.4
Danio rerio
ENSDARG00000070428
I
0.951
smad4a
Danio rerio
ENSDARG00000075226
I
0.990
SMAD4
Dasypus novemcinctus
ENSDNOG00000005063
I
1.000
Smad4
Dipodomys ordii
ENSDORG00000009089
I
1.000
SMAD4
Equus caballus
ENSECAG00000017857
I
1.000
SMAD4
Echinops telfairi
ENSETEG00000007750
I
1.000
SMAD4
Felis catus
ENSFCAG00000005257
I
1.000
SMAD4
Homo sapiens
ENSG00000141646
D
1.000
si:dkey-222b8.1
Gasterosteus aculeatus
ENSGACG00000000538
I
0.961
ENSGACG00000003171
Gasterosteus aculeatus
ENSGACG00000003171
I
0.902
smad4a
Gasterosteus aculeatus
ENSGACG00000007495
I
0.980
ENSGACG00000016858
Gasterosteus aculeatus
ENSGACG00000016858
I
0.980
SMAD4
Gorilla gorilla
ENSGGOG00000013662
I
1.000
ENSGMOG00000000297
Gadus morhua
ENSGMOG00000000297
I
0.951
ENSGMOG00000005844
Gadus morhua
ENSGMOG00000005844
I
0.980
ENSGMOG00000013964
Gadus morhua
ENSGMOG00000013964
I
0.971
ENSLACG00000007810
Latimeria chalumnae
ENSLACG00000007810
I
0.961
SMAD4
Loxodonta africana
ENSLAFG00000012595
I
1.000
ENSLOCG00000012872
Lepisosteus oculatus
ENSLOCG00000012872
I
0.784
ENSMEUG00000001823
Macropus eugenii
ENSMEUG00000001823
I
0.971
SMAD4
Microcebus murinus
ENSMICG00000017525
I
1.000
SMAD4
Myotis lucifugus
ENSMLUG00000013944
I
1.000
SMAD4
Macaca mulatta
ENSMMUG00000018334
I
1.000
SMAD4
Monodelphis domestica
ENSMODG00000010995
I
1.000
ENSMPUG00000008776
Mustela putorius furo
ENSMPUG00000008776
I
1.000
Smad4
Mus musculus
ENSMUSG00000024515
D
1.000
ENSNLEG00000011859
Nomascus leucogenys
ENSNLEG00000011859
I
1.000
SMAD4
Ornithorhynchus anatinus
ENSOANG00000008117
I
1.000
ENSOANG00000030959
Ornithorhynchus anatinus
ENSOANG00000030959
I
1.000
ENSOARG00000004662
Ovis aries
ENSOARG00000004662
I
1.000
SMAD4
Oryctolagus cuniculus
ENSOCUG00000003929
I
1.000
SMAD4
Otolemur garnettii
ENSOGAG00000012081
I
1.000
ENSONIG00000001557
Oreochromis niloticus
ENSONIG00000001557
I
0.941
ENSONIG00000010360
Oreochromis niloticus
ENSONIG00000010360
I
0.961
ENSONIG00000014036
Oreochromis niloticus
ENSONIG00000014036
I
0.980
ENSONIG00000015035
Oreochromis niloticus
ENSONIG00000015035
I
0.980
SMAD4
Ochotona princeps
ENSOPRG00000013601
I
1.000
smad4a
Oryzias latipes
ENSORLG00000005020
I
0.990
SMAD4
Oryzias latipes
ENSORLG00000007703
I
0.990
ENSP00000341551-D1
Bos grunniens
ENSP00000341551-D1
I
1.000
ENSP00000381452
Macaca fascicularis
ENSP00000381452
I
1.000
ENSPANG00000024703
Papio anubis
ENSPANG00000024703
I
1.000
ENSPFOG00000018987
Poecilia formosa
ENSPFOG00000018987
I
0.990
ENSPFOG00000019807
Poecilia formosa
ENSPFOG00000019807
I
0.990
ENSPFOG00000019867
Poecilia formosa
ENSPFOG00000019867
I
0.902
ENSPMAG00000008404
Petromyzon marinus
ENSPMAG00000008404
I
0.951
ENSPMAG00000009414
Petromyzon marinus
ENSPMAG00000009414
I
0.941
ENSPPYG00000009165
Pongo abelii
ENSPPYG00000009165
I
1.000
SMAD4
Pan troglodytes
ENSPTRG00000010028
I
1.000
SMAD4
Pteropus vampyrus
ENSPVAG00000004261
I
1.000
Smad4
Rattus norvegicus
ENSRNOG00000051965
I
1.000
ENSSHAG00000010344
Sarcophilus harrisii
ENSSHAG00000010344
I
1.000
SMAD4
Sus scrofa
ENSSSCG00000004524
I
1.000
ENSSTOG00000028580
Ictidomys tridecemlineatus
ENSSTOG00000028580
I
1.000
SMAD4
Tupaia belangeri
ENSTBEG00000014105
I
1.000
gb:cr929477
Tetraodon nigroviridis
ENSTNIG00000003193
I
0.951
si:dkey-222b8.1
Tetraodon nigroviridis
ENSTNIG00000005007
I
0.902
SMAD4
Tetraodon nigroviridis
ENSTNIG00000009050
I
0.990
si:dkey-222b8.1
Takifugu rubripes
ENSTRUG00000004163
I
0.961
gb:cr929477
Takifugu rubripes
ENSTRUG00000011769
I
0.951
SMAD4
Takifugu rubripes
ENSTRUG00000014045
I
0.990
ENSTSYG00000009792
Tarsius syrichta
ENSTSYG00000009792
I
1.000
SMAD4
Vicugna pacos
ENSVPAG00000006757
I
1.000
ENSXMAG00000005051
Xiphophorus maculatus
ENSXMAG00000005051
I
0.990
ENSXMAG00000015245
Xiphophorus maculatus
ENSXMAG00000015245
I
0.990
e_gw.452.68.1
Branchiostoma floridae
e_gw.452.68.1
I
0.980
Med
Drosophila melanogaster
FBgn0011655
D
0.961
GA14643
Drosophila pseudoobscura
FBgn0074670
I
0.961
GF22974
Drosophila ananassae
FBgn0099968
I
0.961
GG11819
Drosophila erecta
FBgn0104114
I
0.961
GH18642
Drosophila grimshawi
FBgn0126109
I
0.961
GI23400
Drosophila mojavensis
FBgn0146126
I
0.961
GL23637
Drosophila persimilis
FBgn0161227
I
0.961
GM16436
Drosophila sechellia
FBgn0171351
I
0.961
GJ23092
Drosophila virilis
FBgn0210194
I
0.961
GK11724
Drosophila willistoni
FBgn0213735
I
0.961
GE10952
Drosophila yakuba
FBgn0228782
I
0.961
fgenesh2_pg.scaffold_230000050
Branchiostoma floridae
fgenesh2_pg.scaffold_230000050
I
0.912
GB50071
Apis mellifera
GB50071
I
0.961
Gfo_R011803
Geospiza fortis
Gfo_R011803
I
1.000
Gfo_R016223
Geospiza fortis
Gfo_R016223
I
1.000
GPLIN_000772200
Globodera pallida
GPLIN_000772200
I
0.706
GPUH_0001329001
Gongylonema pulchrum
GPUH_0001329001
I
0.794
HelroG76435
Helobdella robusta
HelroG76435
I
0.784
HelroG88197
Helobdella robusta
HelroG88197
I
0.882
HHAL000393-PA
Halyomorpha halys
HHAL000393-PA
I
0.961
HHAL000394-PA
Halyomorpha halys
HHAL000394-PA
I
0.951
HMEL002203
Heliconius melpomene
HMEL002203
I
0.951
HPBE_0001599301
Heligmosomoides bakeri
HPBE_0001599301
I
0.702
Hsal_09633--XP_392838.3_APIME
Harpegnathos saltator
Hsal_09633--XP_392838.3_APIME
I
0.961
ISCW018468
Ixodes scapularis
ISCW018468
I
0.980
KGM_12572
Danaus plexippus
KGM_12572
I
0.951
L798_13939
Zootermopsis nevadensis
L798_13939
I
0.971
LCUP007928
Lucilia cuprina
LCUP007928
I
0.961
LDEC015949
Leptinotarsa decemlineata
LDEC015949
I
0.961
LLOJ008806
Lutzomyia longipalpis
LLOJ008806
I
0.980
LOAG_08923
Loa loa
LOAG_08923
I
0.765
LotgiG131078
Lottia gigantea
LotgiG131078
I
0.941
MCINX014520
Melitaea cinxia
MCINX014520
I
0.951
MDOA012885
Musca domestica
MDOA012885
I
0.961
ML02191a
Mnemiopsis leidyi
ML02191a
I
0.863
Myotis_brandtii_Smad4_10005924
Myotis brandtii
Myotis_brandtii_Smad4_10005924
I
1.000
nAv.1.0.1.g00430
Acanthocheilonema viteae
nAv.1.0.1.g00430
I
0.775
nDi.2.2.2.g01429
Dirofilaria immitis
nDi.2.2.2.g01429
I
0.775
NEMVEDRAFT_v1g18576
Nematostella vectensis
NEMVEDRAFT_v1g18576
I
0.765
NEMVEDRAFT_v1g248037
Nematostella vectensis
NEMVEDRAFT_v1g248037
I
0.931
nLs.2.1.2.g01457
Litomosoides sigmodontis
nLs.2.1.2.g01457
I
0.775
nOo.2.0.1.g00181
Onchocerca ochengi
nOo.2.0.1.g00181
I
0.765
NV12984
Nasonia vitripennis
NV12984
I
0.961
Ocbimv22032358m.g
Octopus bimaculoides
Ocbimv22032358m.g
I
0.941
OESDEN_03018
Oesophagostomum dentatum
OESDEN_03018
I
0.706
Ogr06720
Ophisaurus gracilis
Ogr06720
I
0.971
Ogr14199
Ophisaurus gracilis
Ogr14199
I
1.000
PHUM002670
Pediculus humanus
PHUM002670
I
0.971
PPAI002168
Phlebotomus papatasi
PPAI002168
I
0.980
Pvit_01119
Pogona vitticeps
Pvit_01119
I
1.000
RPRC010188
Rhodnius prolixus
RPRC010188
I
0.951
Sakowv30001112m.g
Saccoglossus kowalevskii
Sakowv30001112m.g
I
0.746
SINV15516
Solenopsis invicta
SINV15516
I
0.961
Sjc_0030450
Schistosoma japonicum
Sjc_0030450
I
0.755
SMAR013850
Strigamia maritima
SMAR013850
I
0.971
Smp_033950
Schistosoma mansoni
Smp_033950
I
0.725
SMTD_0002197901
Schistosoma mattheei
SMTD_0002197901
I
0.725
SMU15015494
Schmidtea mediterranea
SMU15015494
I
0.814
SPU_004287
Strongylocentrotus purpuratus
SPU_004287
I
0.941
SPU_017971
Strongylocentrotus purpuratus
SPU_017971
I
0.873
SROB_0000384401
Schistosoma rodhaini
SROB_0000384401
I
0.716
SVUK_0000938201
Strongylus vulgaris
SVUK_0000938201
I
0.706
T265_11013
Opisthorchis viverrini
T265_11013
I
0.804
TC010848
Tribolium castaneum
TC010848
I
0.961
TCLT_0000917301
Thelazia callipaeda
TCLT_0000917301
I
0.765
TELCIR_19676
Teladorsagia circumcincta
TELCIR_19676
I
0.706
tetur10g00380
Tetranychus urticae
tetur10g00380
I
0.767
tetur10g00400
Tetranychus urticae
tetur10g00400
I
0.912
TMUE_s0006012700
Trichuris muris
TMUE_s0006012700
I
0.833
TRE_0001987301
Trichobilharzia regenti
TRE_0001987301
I
0.775
TriadG30731
Trichoplax adhaerens
TriadG30731
I
0.804
TTRE_0000855901
Trichuris trichiura
TTRE_0000855901
I
0.833
WBGene00241622
Onchocerca volvulus
WBGene00241622
I
0.765
WUBG_02880
Wuchereria bancrofti
WUBG_02880
I
0.775
smad4.1
Xenopus tropicalis
XB-GENE-485691
I
1.000
smad4.2.S
Xenopus laevis
XB-GENE-5995204
I
0.961
smad4.2.L
Xenopus laevis
XB-GENE-6256010
I
0.961
smad4.1.L
Xenopus laevis
XB-GENE-865543
I
1.000
XP_002161797.1
Hydra magnipapillata
XP_002161797.1
I
0.882
YQE_06624
Dendroctonus ponderosae
YQE_06624
I
0.951
YQE_08737
Dendroctonus ponderosae
YQE_08737
I
0.892