YQE_07842 (Dendroctonus ponderosae)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 YQE_07842 T325243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		1.000 1.000
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		1.000 1.000
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		1.000 1.000
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		1.000 1.000
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.917 0.917
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.917 0.917
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.917 0.917
SMAD5
M05743_2.00 		Homo sapiens
YGTCTAGACW
WGTCTAGACR		 SELEX
Yin et al.(2017)
SMAD5_eDBD_HT-SELEX 		0.861 0.861
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.861 0.861
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.861 0.861
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.861 0.861
SMAD5
M11271_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_02 		0.861 0.861
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.861 0.861
SMAD5
M11272_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_Q5_01 		0.861 0.861
SMAD5
M11273_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_Q5 		0.861 0.861
SMAD5
M05744_2.00 		Homo sapiens
CGTCTAGACR
YGTCTAGACG		 SELEX
Yin et al.(2017)
SMAD5_eDBD_Methyl-HT-SELEX 		0.861 0.861
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN75595 SMAD 61 96

Links

Other SMAD family TFs
Other Dendroctonus ponderosae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF239 Bos taurus ENSBTAG00000019039 N
ZNF239 Canis familiaris ENSCAFG00000031910 N
ZNF239 Callithrix jacchus ENSCJAG00000016278 N
ENSCSAG00000018415 Chlorocebus sabaeus ENSCSAG00000018415 N
ZNF239 Dasypus novemcinctus ENSDNOG00000004406 N
ZNF239 Equus caballus ENSECAG00000003179 N
ZNF239 Felis catus ENSFCAG00000023538 N
ZNF239 Homo sapiens ENSG00000196793 N
ZNF239 Gorilla gorilla ENSGGOG00000001913 N
ENSMMUG00000022433 Macaca mulatta ENSMMUG00000022433 N
ENSMPUG00000020136 Mustela putorius furo ENSMPUG00000020136 N
ENSNLEG00000015896 Nomascus leucogenys ENSNLEG00000015896 N
ENSOARG00000003720 Ovis aries ENSOARG00000003720 N
ZNF239 Oryctolagus cuniculus ENSOCUG00000010992 N
ENSPANG00000022661 Papio anubis ENSPANG00000022661 N
ZNF239 Procavia capensis ENSPCAG00000006595 N
ENSPPYG00000002214 Pongo abelii ENSPPYG00000002214 N
ZNF239 Pan troglodytes ENSPTRG00000022725 N
ZNF239 Sus scrofa ENSSSCG00000029576 N
ENSTSYG00000004834 Tarsius syrichta ENSTSYG00000004834 N
ZNF239 Vicugna pacos ENSVPAG00000012405 N
Myotis_brandtii_ZNF239_10002120 Myotis brandtii Myotis_brandtii_ZNF239_10002120 N